RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 LBX1P52954 281 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 MTTPP55157 894 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 TLR1Q15399 786 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 NRF1Q16656 503 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 RAB43Q86YS6 212 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 FAM86B1Q8N7N1 296 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 TCF7L1Q9HCS4 588 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 DTLQ9NZJ0 730 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 CNOT6Q9ULM6 557 aaKnown RBP8.16□□□□□ -1.1
CHD8-213ENST00000557364 OAS3Q9Y6K5 1087 aaKnown RBP8.16□□□□□ -1.1
CHD8-213ENST00000557364 SHPRHQ149N8 1683 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 YKT6O15498 198 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 KLF8O95600 359 aaPredicted RBP8.16□□□□□ -1.1
CHD8-213ENST00000557364 MAPK3P27361 379 aaPredicted RBP8.16□□□□□ -1.1
CHD8-213ENST00000557364 NFATC2Q13469 925 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 RAB39AQ14964 217 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 LAPTM4BQ86VI4 370 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 SCAMP5Q8TAC9 235 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 PYDC1Q8WXC3 89 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 SMPDL3BQ92485 455 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 CPT1BQ92523 772 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 C1GALT1C1Q96EU7 318 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 LGALS13Q9UHV8 139 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 ATP6AP2A0A1C7CYW4 349 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 ATP6AP2O75787 350 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 MARCKSL1P49006 195 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 SRP54P61011 504 aaKnown RBP8.16□□□□□ -1.1
CHD8-213ENST00000557364 FGL2Q14314 439 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 PITRM1Q5JRX3 1037 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 PLCZ1Q86YW0 608 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 NPLOC4Q8TAT6 608 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 CYB5D2Q8WUJ1 264 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 TMCO6Q96DC7 493 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 PPM1MQ96MI6 270 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 VRTNQ9H8Y1 702 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 ADAP2Q9NPF8 381 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 FAM120CQ9NX05 1096 aaKnown RBP8.16□□□□□ -1.1
CHD8-213ENST00000557364 KLF15Q9UIH9 416 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 A0A1W2PRG6 482 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 DDX3YO15523 660 aaKnown RBP8.16□□□□□ -1.1
CHD8-213ENST00000557364 CBX6O95503 412 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 HSD3B1P14060 373 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 HSD3B2P26439 372 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 ZNF84P51523 738 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 RBPJQ06330 500 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 RBBP4Q09028 425 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 RGS21Q2M5E4 152 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 LY6G5CQ5SRR4 150 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 DENND5AQ6IQ26 1287 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 TMIGD1Q6UXZ0 262 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 Q6ZVU0 165 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 NXPE1Q8N323 547 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 C9orf43Q8TAL5 461 aaPredicted RBP8.16□□□□□ -1.1
CHD8-213ENST00000557364 KAT2AQ92830 837 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 RBP7Q96R05 134 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 GPR34Q9UPC5 381 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 IFT52Q9Y366 437 aa8.16□□□□□ -1.1
CHD8-213ENST00000557364 LAMB4A4D0S4 1761 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 METTL21EPA6NDL7 271 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 FTCDNL1E5RQL4 147 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 ADAMTS3O15072 1205 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 EDF1O60869 148 aaKnown RBP8.15□□□□□ -1.1
CHD8-213ENST00000557364 IL33O95760 270 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 UGT1A4P22310 534 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 HSD17B7P56937 341 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 PPP2R2BQ00005 443 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 SWI5Q1ZZU3 235 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 UNC5DQ6UXZ4 953 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 ARHGAP12Q8IWW6 846 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 C2orf73Q8N5S3 287 aaPredicted RBP8.15□□□□□ -1.1
CHD8-213ENST00000557364 CDKN2AIPNLQ96HQ2 116 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 MARK4Q96L34 752 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 TMEM209Q96SK2 561 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 MAGEE1Q9HCI5 957 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 FKBP14Q9NWM8 211 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 NUAK1O60285 661 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 LINGO3P0C6S8 592 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 ITIH1P19827 911 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 GADD45AP24522 165 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 RPL5P46777 297 aaKnown RBP8.15□□□□□ -1.1
CHD8-213ENST00000557364 RPS15AP62244 130 aaKnown RBP8.15□□□□□ -1.1
CHD8-213ENST00000557364 MELKQ14680 651 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 GPAT4Q86UL3 456 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 PMEPA1Q969W9 287 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 CENPNQ96H22 339 aaPredicted RBP8.15□□□□□ -1.1
CHD8-213ENST00000557364 TMEM121BQ9BXQ6 578 aaPredicted RBP8.15□□□□□ -1.1
CHD8-213ENST00000557364 PAIP1Q9H074 479 aaKnown RBP8.15□□□□□ -1.1
CHD8-213ENST00000557364 WNT6Q9Y6F9 365 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 SIGLEC1Q9BZZ2 1709 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 PRAMEF11O60813 436 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 THRBP10828 461 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 GJA1P17302 382 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 IMPDH1P20839 514 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 VLDLRP98155 873 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 SLC10A7Q0GE19 358 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 PAFAH1B3Q15102 231 aaKnown RBP8.15□□□□□ -1.1
CHD8-213ENST00000557364 TMPPEQ6ZT21 453 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 NANOGNBQ7Z5D8 188 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 DNAJA4Q8WW22 397 aaPredicted RBP8.15□□□□□ -1.1
CHD8-213ENST00000557364 NARS2Q96I59 477 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms