RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 KIAA0754O94854 1291 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 TIAF1O95411 115 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 DLGAP3O95886 979 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 ZNF28P17035 718 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 CCND1P24385 295 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 CNTFP26441 200 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 TYK2P29597 1187 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 SLC26A3P40879 764 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 ITGA1P56199 1179 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 VSNL1P62760 191 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 CDKL1Q00532 357 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 PRDX1Q06830 199 aaKnown RBP13.06□□□□□ -0.32
SHMT2-228ENST00000557302 NAE1Q13564 534 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 SLC29A2Q14542 456 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 TGIF1Q15583 401 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 PRAMEF13Q5VWM6 474 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 FCRL6Q6DN72 434 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 GPR135Q8IZ08 494 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 NLGN4XQ8N0W4 816 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 DNAJC22Q8N4W6 341 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 NLGN4YQ8NFZ3 816 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-228ENST00000557302 DCAKDQ8WVC6 231 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 ALKBH8Q96BT7 664 aaKnown RBP13.06□□□□□ -0.32
SHMT2-228ENST00000557302 RNF31Q96EP0 1072 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 MED8Q96G25 268 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 EGFL8Q99944 293 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 DPH7Q9BTV6 452 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 SPRY4Q9C004 299 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 NMRAL1Q9HBL8 299 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 SLC6A20Q9NP91 592 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 ANKMY1Q9P2S6 941 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.06□□□□□ -0.32
SHMT2-228ENST00000557302 ZNF180Q9UJW8 692 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 TLK1Q9UKI8 766 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 PLCL2Q9UPR0 1127 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 ACOT9Q9Y305 439 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 OARD1Q9Y530 152 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 V9GYY5 206 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-228ENST00000557302 A0A087X1B8 175 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 E7EQ34 232 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 CPNE3O75131 537 aaKnown RBP13.05□□□□□ -0.32
SHMT2-228ENST00000557302 OR2B3O76000 313 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 MT-ND3P03897 115 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 ALDOAP04075 364 aaKnown RBP13.05□□□□□ -0.32
SHMT2-228ENST00000557302 C2P06681 752 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 ANXA5P08758 320 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 LTA4HP09960 611 aaKnown RBP13.05□□□□□ -0.32
SHMT2-228ENST00000557302 ITPKBP27987 946 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 GMPRP36959 345 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 GABRA4P48169 554 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 YBX1P67809 324 aaKnown RBP13.05□□□□□ -0.32
SHMT2-228ENST00000557302 TLE3Q04726 772 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 MAP7Q14244 749 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 ZC3H12BQ5HYM0 836 aaKnown RBP13.05□□□□□ -0.32
SHMT2-228ENST00000557302 LGSNQ5TDP6 509 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 BROXQ5VW32 411 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 CAPN13Q6MZZ7 669 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-228ENST00000557302 C6orf15Q6UXA7 325 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-228ENST00000557302 GPSM1Q86YR5 675 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 MCATQ8IVS2 390 aaKnown RBP13.05□□□□□ -0.32
SHMT2-228ENST00000557302 CACNA2D3Q8IZS8 1091 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 ESX1Q8N693 406 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 IL22RA1Q8N6P7 574 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 UBLCP1Q8WVY7 318 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-228ENST00000557302 NKD1Q969G9 470 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 CCDC77Q9BR77 488 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 PLCD4Q9BRC7 762 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 SGPP1Q9BX95 441 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 EPB41L4BQ9H329 900 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 IRAK4Q9NWZ3 460 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 EURLQ9NYK6 297 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 SNX7Q9UNH6 387 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 PCDHB3Q9Y5E6 796 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 SDK2Q58EX2 2172 aa13.05□□□□□ -0.32
SHMT2-228ENST00000557302 A0A096LPK6 155 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 TEX51A0A1B0GUA7 166 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 OR2A25A4D2G3 310 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 TRIM49D1C9J1S8 452 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 HCRTR1O43613 425 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 CTSVO60911 334 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 NTRK1P04629 796 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 TFEBP19484 476 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 HNMTP50135 292 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 CSRP3P50461 194 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 UCNP55089 124 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 DLG1Q12959 904 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 TGFBIQ15582 683 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 OR4D1Q15615 310 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 FAM83EQ2M2I3 478 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 ERCC6LQ2NKX8 1250 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 MANEAQ5SRI9 462 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 WDR93Q6P2C0 686 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 LCTLQ6UWM7 567 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 TIPARPQ7Z3E1 657 aaKnown RBP13.04□□□□□ -0.32
SHMT2-228ENST00000557302 ADCK2Q7Z695 626 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 PAQR7Q86WK9 346 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 GALNT6Q8NCL4 622 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 OR56A3Q8NH54 315 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 ISL2Q96A47 359 aa13.04□□□□□ -0.32
SHMT2-228ENST00000557302 KIAA1191Q96A73 305 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms