RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 DPH2Q9BQC3 489 aaPredicted RBP10.26□□□□□ -0.77
LINC00239-201ENST00000556973 PLCD4Q9BRC7 762 aa10.26□□□□□ -0.77
LINC00239-201ENST00000556973 GPR87Q9BY21 358 aa10.26□□□□□ -0.77
LINC00239-201ENST00000556973 FAM117AQ9C073 453 aa10.26□□□□□ -0.77
LINC00239-201ENST00000556973 DERL2Q9GZP9 239 aa10.26□□□□□ -0.77
LINC00239-201ENST00000556973 SPRTNQ9H040 489 aaPredicted RBP10.26□□□□□ -0.77
LINC00239-201ENST00000556973 ACTR5Q9H9F9 607 aaPredicted RBP10.26□□□□□ -0.77
LINC00239-201ENST00000556973 CAB39LQ9H9S4 337 aa10.26□□□□□ -0.77
LINC00239-201ENST00000556973 CCDC177Q9NQR7 707 aaPredicted RBP10.26□□□□□ -0.77
LINC00239-201ENST00000556973 ENAMQ9NRM1 1142 aa10.26□□□□□ -0.77
LINC00239-201ENST00000556973 TAC3Q9UHF0 121 aa10.26□□□□□ -0.77
LINC00239-201ENST00000556973 KCND3Q9UK17 655 aa10.26□□□□□ -0.77
LINC00239-201ENST00000556973 OR2A25A4D2G3 310 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 C21orf140B9A014 251 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 CDC7O00311 574 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 TERTO14746 1132 aaKnown RBP10.25□□□□□ -0.77
LINC00239-201ENST00000556973 WISP3O95389 354 aaPredicted RBP10.25□□□□□ -0.77
LINC00239-201ENST00000556973 ACSL3O95573 720 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 GUCA1CO95843 209 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 ANXA5P08758 320 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 CCDC166P0CW27 439 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 NPPBP16860 134 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 AGXTP21549 392 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 CRABP2P29373 138 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 RORAP35398 523 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 HNMTP50135 292 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 ARSFP54793 590 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 ATP6V0D1P61421 351 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 YBX1P67809 324 aaKnown RBP10.25□□□□□ -0.77
LINC00239-201ENST00000556973 CDKL1Q00532 357 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 MC1RQ01726 317 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 GPS2Q13227 327 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 NAE1Q13564 534 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 ZKSCAN8Q15776 578 aaPredicted RBP10.25□□□□□ -0.77
LINC00239-201ENST00000556973 DEFB110Q30KQ9 67 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 CRTC2Q53ET0 693 aaPredicted RBP10.25□□□□□ -0.77
LINC00239-201ENST00000556973 PRAMEF17Q5VTA0 474 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 ZNF425Q6IV72 752 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 CAPN13Q6MZZ7 669 aaPredicted RBP10.25□□□□□ -0.77
LINC00239-201ENST00000556973 FAM199XQ6PEV8 388 aaPredicted RBP10.25□□□□□ -0.77
LINC00239-201ENST00000556973 RAPH1Q70E73 1250 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 RNF44Q7L0R7 432 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 ADAMTSL2Q86TH1 951 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 MR1Q95460 341 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 FBXL8Q96CD0 374 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 RNF31Q96EP0 1072 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 MED8Q96G25 268 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 ZNF285Q96NJ3 590 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 ZFYVE21Q9BQ24 234 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 SELENOSQ9BQE4 189 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 NDC1Q9BTX1 674 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 ATG10Q9H0Y0 220 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 ACSS3Q9H6R3 686 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 SLC6A20Q9NP91 592 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 ABCF3Q9NUQ8 709 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 PCMTD2Q9NV79 361 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 TMEM184CQ9NVA4 438 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 IRAK4Q9NWZ3 460 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 CTNNAL1Q9UBT7 734 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 CROTQ9UKG9 612 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 SRPK3Q9UPE1 567 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 OARD1Q9Y530 152 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 PCDHGA6Q9Y5G7 932 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 PCDHGA4Q9Y5G9 962 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 TPRP12270 2363 aaKnown RBP10.25□□□□□ -0.77
LINC00239-201ENST00000556973 IGF2RP11717 2491 aa10.25□□□□□ -0.77
LINC00239-201ENST00000556973 ACACAQ13085 2346 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 USP24Q9UPU5 2620 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 ANKRD12Q6UB98 2062 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 A0A087WUV0 522 aaPredicted RBP10.24□□□□□ -0.77
LINC00239-201ENST00000556973 IGKV1-8A0A0C4DH67 115 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 A0A0J9YVX5 310 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 FITM1A5D6W6 292 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 ZNF891A8MT65 544 aaPredicted RBP10.24□□□□□ -0.77
LINC00239-201ENST00000556973 ZSCAN9O15535 394 aaPredicted RBP10.24□□□□□ -0.77
LINC00239-201ENST00000556973 PHGDHO43175 533 aaKnown RBP10.24□□□□□ -0.77
LINC00239-201ENST00000556973 CTSVO60911 334 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 KATNA1O75449 491 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 RECKO95980 971 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 RAB40ALP0C0E4 278 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 CD1DP15813 335 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 WT1P19544 449 aaPredicted RBP10.24□□□□□ -0.77
LINC00239-201ENST00000556973 F8A1P23610 371 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 SLC26A3P40879 764 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 PMS2P54278 862 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 TBPL1P62380 186 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 RPS15P62841 145 aaKnown RBP10.24□□□□□ -0.77
LINC00239-201ENST00000556973 RHDQ02161 417 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 DNASE1L3Q13609 305 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 GRM7Q14831 915 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 EFTUD2Q15029 972 aaKnown RBP eCLIP10.24□□□□□ -0.77
LINC00239-201ENST00000556973 TSNQ15631 228 aaKnown RBP10.24□□□□□ -0.77
LINC00239-201ENST00000556973 PPP1R3AQ16821 1122 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 FAM214AQ32MH5 1076 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 WASHC2DQ5SRD0 308 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 MROH9Q5TGP6 573 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 YOD1Q5VVQ6 348 aaPredicted RBP10.24□□□□□ -0.77
LINC00239-201ENST00000556973 PRAMEF13Q5VWM6 474 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 RHBDD2Q6NTF9 364 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 LCTLQ6UWM7 567 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms