RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 TCN2P20062 427 aa21.94■■□□□ 1.1
TDP1-216ENST00000556867 PRDX1Q06830 199 aaKnown RBP21.94■■□□□ 1.1
TDP1-216ENST00000556867 TSTA3Q13630 321 aaPredicted RBP21.94■■□□□ 1.1
TDP1-216ENST00000556867 ZNF460Q14592 562 aa21.94■■□□□ 1.1
TDP1-216ENST00000556867 CRTC2Q53ET0 693 aaPredicted RBP21.94■■□□□ 1.1
TDP1-216ENST00000556867 ICE2Q659A1 982 aa21.94■■□□□ 1.1
TDP1-216ENST00000556867 CEP97Q8IW35 865 aa21.94■■□□□ 1.1
TDP1-216ENST00000556867 ANKRD7Q92527 254 aa21.94■■□□□ 1.1
TDP1-216ENST00000556867 MR1Q95460 341 aa21.94■■□□□ 1.1
TDP1-216ENST00000556867 ZNF285Q96NJ3 590 aa21.94■■□□□ 1.1
TDP1-216ENST00000556867 DPH7Q9BTV6 452 aa21.94■■□□□ 1.1
TDP1-216ENST00000556867 SLC7A5P2Q9GIP4 190 aa21.94■■□□□ 1.1
TDP1-216ENST00000556867 MRPS30Q9NP92 439 aaKnown RBP21.94■■□□□ 1.1
TDP1-216ENST00000556867 SRPK3Q9UPE1 567 aa21.94■■□□□ 1.1
TDP1-216ENST00000556867 MTO1Q9Y2Z2 717 aaKnown RBP21.94■■□□□ 1.1
TDP1-216ENST00000556867 ENO2P09104 434 aaPredicted RBP21.93■■□□□ 1.1
TDP1-216ENST00000556867 HIST1H2AGP0C0S8 130 aaPredicted RBP21.93■■□□□ 1.1
TDP1-216ENST00000556867 HIST1H2ADP20671 130 aa21.93■■□□□ 1.1
TDP1-216ENST00000556867 ECHS1P30084 290 aa21.93■■□□□ 1.1
TDP1-216ENST00000556867 SLC12A2P55011 1212 aa21.93■■□□□ 1.1
TDP1-216ENST00000556867 AP1S2P56377 157 aa21.93■■□□□ 1.1
TDP1-216ENST00000556867 YBX1P67809 324 aaKnown RBP21.93■■□□□ 1.1
TDP1-216ENST00000556867 ABATP80404 500 aa21.93■■□□□ 1.1
TDP1-216ENST00000556867 MC1RQ01726 317 aa21.93■■□□□ 1.1
TDP1-216ENST00000556867 RHBDD2Q6NTF9 364 aa21.93■■□□□ 1.1
TDP1-216ENST00000556867 FAM199XQ6PEV8 388 aaPredicted RBP21.93■■□□□ 1.1
TDP1-216ENST00000556867 MBOAT1Q6ZNC8 495 aa21.93■■□□□ 1.1
TDP1-216ENST00000556867 RNF44Q7L0R7 432 aa21.93■■□□□ 1.1
TDP1-216ENST00000556867 PPM1NQ8N819 430 aa21.93■■□□□ 1.1
TDP1-216ENST00000556867 IFT81Q8WYA0 676 aa21.93■■□□□ 1.1
TDP1-216ENST00000556867 TSPAN17Q96FV3 270 aa21.93■■□□□ 1.1
TDP1-216ENST00000556867 HIST1H2AHQ96KK5 128 aa21.93■■□□□ 1.1
TDP1-216ENST00000556867 FMO2Q99518 471 aa21.93■■□□□ 1.1
TDP1-216ENST00000556867 HIST1H2AJQ99878 128 aa21.93■■□□□ 1.1
TDP1-216ENST00000556867 DPH2Q9BQC3 489 aaPredicted RBP21.93■■□□□ 1.1
TDP1-216ENST00000556867 H2AFJQ9BTM1 129 aa21.93■■□□□ 1.1
TDP1-216ENST00000556867 FAM117AQ9C073 453 aa21.93■■□□□ 1.1
TDP1-216ENST00000556867 CHST8Q9H2A9 424 aa21.93■■□□□ 1.1
TDP1-216ENST00000556867 CCDC177Q9NQR7 707 aaPredicted RBP21.93■■□□□ 1.1
TDP1-216ENST00000556867 NOVA2Q9UNW9 492 aaKnown RBP21.93■■□□□ 1.1
TDP1-216ENST00000556867 MRPS18BQ9Y676 258 aaKnown RBP21.93■■□□□ 1.1
TDP1-216ENST00000556867 IGKV1-8A0A0C4DH67 115 aa21.92■■□□□ 1.1
TDP1-216ENST00000556867 NRP2O60462 931 aa21.92■■□□□ 1.1
TDP1-216ENST00000556867 WISP3O95389 354 aaPredicted RBP21.92■■□□□ 1.1
TDP1-216ENST00000556867 ITGB2P05107 769 aa21.92■■□□□ 1.1
TDP1-216ENST00000556867 SPRP35270 261 aaPredicted RBP21.92■■□□□ 1.1
TDP1-216ENST00000556867 GCGRP47871 477 aa21.92■■□□□ 1.1
TDP1-216ENST00000556867 TBPL1P62380 186 aa21.92■■□□□ 1.1
TDP1-216ENST00000556867 CYP4F2P78329 520 aa21.92■■□□□ 1.1
TDP1-216ENST00000556867 GRTP1Q5TC63 336 aa21.92■■□□□ 1.1
TDP1-216ENST00000556867 ZNF385CQ66K41 422 aaPredicted RBP21.92■■□□□ 1.1
TDP1-216ENST00000556867 ZNF425Q6IV72 752 aa21.92■■□□□ 1.1
TDP1-216ENST00000556867 AGTRAPQ6RW13 159 aa21.92■■□□□ 1.1
TDP1-216ENST00000556867 SBSNQ6UWP8 590 aa21.92■■□□□ 1.1
TDP1-216ENST00000556867 ZNF655Q8N720 491 aaPredicted RBP21.92■■□□□ 1.1
TDP1-216ENST00000556867 WBP1Q96G27 269 aa21.92■■□□□ 1.1
TDP1-216ENST00000556867 PLCD4Q9BRC7 762 aa21.92■■□□□ 1.1
TDP1-216ENST00000556867 GPR87Q9BY21 358 aa21.92■■□□□ 1.1
TDP1-216ENST00000556867 TRIM54Q9BYV2 358 aa21.92■■□□□ 1.1
TDP1-216ENST00000556867 GPAMQ9HCL2 828 aa21.92■■□□□ 1.1
TDP1-216ENST00000556867 IRAK4Q9NWZ3 460 aa21.92■■□□□ 1.1
TDP1-216ENST00000556867 NINJ2Q9NZG7 142 aa21.92■■□□□ 1.1
TDP1-216ENST00000556867 IKZF3Q9UKT9 509 aa21.92■■□□□ 1.1
TDP1-216ENST00000556867 MDC1Q14676 2089 aaKnown RBP21.92■■□□□ 1.1
TDP1-216ENST00000556867 PABPN1LA6NDY0 278 aaKnown RBP21.91■■□□□ 1.1
TDP1-216ENST00000556867 ATXN7O15265 892 aaPredicted RBP21.91■■□□□ 1.1
TDP1-216ENST00000556867 NKX2-8O15522 239 aa21.91■■□□□ 1.1
TDP1-216ENST00000556867 SRPX2O60687 465 aaPredicted RBP21.91■■□□□ 1.1
TDP1-216ENST00000556867 CDC20Q12834 499 aa21.91■■□□□ 1.1
TDP1-216ENST00000556867 USP10Q14694 798 aaKnown RBP21.91■■□□□ 1.1
TDP1-216ENST00000556867 EFTUD2Q15029 972 aaKnown RBP eCLIP21.91■■□□□ 1.1
TDP1-216ENST00000556867 PPP1R3AQ16821 1122 aa21.91■■□□□ 1.1
TDP1-216ENST00000556867 PTCHD3Q3KNS1 767 aa21.91■■□□□ 1.1
TDP1-216ENST00000556867 TCTE1Q5JU00 501 aa21.91■■□□□ 1.1
TDP1-216ENST00000556867 THEMIS2Q5TEJ8 643 aa21.91■■□□□ 1.1
TDP1-216ENST00000556867 PCSK4Q6UW60 755 aa21.91■■□□□ 1.1
TDP1-216ENST00000556867 PAQR7Q86WK9 346 aa21.91■■□□□ 1.1
TDP1-216ENST00000556867 LSM14AQ8ND56 463 aaKnown RBP21.91■■□□□ 1.1
TDP1-216ENST00000556867 PROKR1Q8TCW9 393 aa21.91■■□□□ 1.1
TDP1-216ENST00000556867 ANKRD49Q8WVL7 239 aa21.91■■□□□ 1.1
TDP1-216ENST00000556867 SELENOSQ9BQE4 189 aa21.91■■□□□ 1.1
TDP1-216ENST00000556867 NDC1Q9BTX1 674 aa21.91■■□□□ 1.1
TDP1-216ENST00000556867 PCBD2Q9H0N5 130 aa21.91■■□□□ 1.1
TDP1-216ENST00000556867 CAB39LQ9H9S4 337 aa21.91■■□□□ 1.1
TDP1-216ENST00000556867 ARL15Q9NXU5 204 aa21.91■■□□□ 1.1
TDP1-216ENST00000556867 UTP6Q9NYH9 597 aaKnown RBP21.91■■□□□ 1.1
TDP1-216ENST00000556867 KATNA1O75449 491 aa21.9■■□□□ 1.1
TDP1-216ENST00000556867 RECKO95980 971 aa21.9■■□□□ 1.1
TDP1-216ENST00000556867 CCND1P24385 295 aa21.9■■□□□ 1.1
TDP1-216ENST00000556867 PHBP35232 272 aa21.9■■□□□ 1.1
TDP1-216ENST00000556867 RPS15P62841 145 aaKnown RBP21.9■■□□□ 1.1
TDP1-216ENST00000556867 RELAQ04206 551 aa21.9■■□□□ 1.1
TDP1-216ENST00000556867 ZKSCAN8Q15776 578 aaPredicted RBP21.9■■□□□ 1.1
TDP1-216ENST00000556867 SOWAHCQ53LP3 525 aaPredicted RBP21.9■■□□□ 1.1
TDP1-216ENST00000556867 PRAMEF13Q5VWM6 474 aa21.9■■□□□ 1.1
TDP1-216ENST00000556867 LCN10Q6JVE6 187 aa21.9■■□□□ 1.1
TDP1-216ENST00000556867 FAM198BQ6UWH4 519 aa21.9■■□□□ 1.1
TDP1-216ENST00000556867 FBXL8Q96CD0 374 aa21.9■■□□□ 1.1
TDP1-216ENST00000556867 CATSPER2Q96P56 530 aa21.9■■□□□ 1.1
TDP1-216ENST00000556867 BBC3Q96PG8 261 aaPredicted RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms