RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 KLHL3Q9UH77 587 aa16.79■□□□□ 0.28
TUBB3-211ENST00000556536 SLC22A14Q9Y267 594 aa16.79■□□□□ 0.28
TUBB3-211ENST00000556536 PCDHB11Q9Y5F2 797 aa16.79■□□□□ 0.28
TUBB3-211ENST00000556536 ANKRD11Q6UB99 2663 aaPredicted RBP16.79■□□□□ 0.28
TUBB3-211ENST00000556536 MN1Q10571 1320 aaPredicted RBP16.78■□□□□ 0.28
TUBB3-211ENST00000556536 D6RAR5 112 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 MATN2O00339 956 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 DKK1O94907 266 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 C9P02748 559 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 DHRS4L1P0CG22 281 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 NPPBP16860 134 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 ALDH3A1P30838 453 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 SLC18A1P54219 525 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 WDR4P57081 412 aaKnown RBP16.78■□□□□ 0.28
TUBB3-211ENST00000556536 E2F1Q01094 437 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 INSM1Q01101 510 aaPredicted RBP16.78■□□□□ 0.28
TUBB3-211ENST00000556536 PCBP2Q15366 365 aaKnown RBP eCLIP16.78■□□□□ 0.282e-6■■□□□ 13.3
TUBB3-211ENST00000556536 SF1Q15637 639 aaKnown RBP16.78■□□□□ 0.28
TUBB3-211ENST00000556536 SLC5A12Q1EHB4 618 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 TMEM71Q6P5X7 295 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 DHRS13Q6UX07 377 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 RPS27LQ71UM5 84 aaKnown RBP16.78■□□□□ 0.28
TUBB3-211ENST00000556536 PLXDC1Q8IUK5 500 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 MDM1Q8TC05 714 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 MGARPQ8TDB4 240 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 SLC22A18Q96BI1 424 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 ZDHHC12Q96GR4 267 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 TMEM237Q96Q45 408 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 MAP3K3Q99759 626 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 SEMA6CQ9H3T2 930 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 MED4Q9NPJ6 270 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 DNAJC11Q9NVH1 559 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 OXSMQ9NWU1 459 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 MID2Q9UJV3 735 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 KLHL20Q9Y2M5 609 aa16.78■□□□□ 0.28
TUBB3-211ENST00000556536 GOLGA4Q13439 2230 aaKnown RBP16.78■□□□□ 0.28
TUBB3-211ENST00000556536 TMEM8BA6NDV4 472 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 K7EPI3 171 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 BPGMP07738 259 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 PVRP15151 417 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 EPORP19235 508 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 CCND1P24385 295 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 SERPINB4P48594 390 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 SPIDRQ14159 915 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 UNC50Q53HI1 259 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 HSP90B2PQ58FF3 399 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 SNAP47Q5SQN1 464 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 ZNF678Q5SXM1 525 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 KIAA1614Q5VZ46 1190 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 ICE2Q659A1 982 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 LCTLQ6UWM7 567 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 LRRC70Q7Z2Q7 622 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 RAB44Q7Z6P3 723 aaPredicted RBP16.77■□□□□ 0.28
TUBB3-211ENST00000556536 SLC22A9Q8IVM8 553 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 SNX31Q8N9S9 440 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 OR2L3Q8NG85 312 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 OR4D9Q8NGE8 314 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 NSUN5Q96P11 429 aaKnown RBP16.77■□□□□ 0.28
TUBB3-211ENST00000556536 KLHL25Q9H0H3 589 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 PCBD2Q9H0N5 130 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 SLC6A20Q9NP91 592 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 NKIRAS1Q9NYS0 192 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 OPTCQ9UBM4 332 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 PCTPQ9UKL6 214 aa16.77■□□□□ 0.28
TUBB3-211ENST00000556536 TNPO3Q9Y5L0 923 aaKnown RBP16.77■□□□□ 0.28
TUBB3-211ENST00000556536 FASNP49327 2511 aaKnown RBP16.77■□□□□ 0.28
TUBB3-211ENST00000556536 IGHV5-51A0A0C4DH38 117 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 IGKV1-8A0A0C4DH67 115 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 IGHV5-10-1A0A0J9YXX1 117 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 A0A0J9YY10 115 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 WDR91A4D1P6 747 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 E2F3O00716 465 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 PRAMEF10O60809 474 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 RPS17P08708 135 aaKnown RBP16.76■□□□□ 0.27
TUBB3-211ENST00000556536 IMPDH1P20839 514 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 PDX1P52945 283 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 DNAJB13P59910 316 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 HERVK_113P63132 956 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 PPP2R2AP63151 447 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 PRDX1Q06830 199 aaKnown RBP16.76■□□□□ 0.27
TUBB3-211ENST00000556536 CLPPQ16740 277 aaPredicted RBP16.76■□□□□ 0.27
TUBB3-211ENST00000556536 CDCP2Q5VXM1 449 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 GOLGA7Q7Z5G4 137 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 B3GNT8Q7Z7M8 397 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 SLITRK4Q8IW52 837 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 TEX9Q8N6V9 391 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 WDR48Q8TAF3 677 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 ZNF483Q8TF39 744 aaPredicted RBP16.76■□□□□ 0.27
TUBB3-211ENST00000556536 CCDC126Q96EE4 140 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 L3HYPDHQ96EM0 354 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 DPYSL5Q9BPU6 564 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 PAIP2Q9BPZ3 127 aaKnown RBP16.76■□□□□ 0.27
TUBB3-211ENST00000556536 C1QTNF3Q9BXJ4 246 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 ERVK-6Q9BXR3 956 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 CUEDC1Q9NWM3 386 aaPredicted RBP16.76■□□□□ 0.27
TUBB3-211ENST00000556536 PDP2Q9P2J9 529 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 APOBEC2Q9Y235 224 aaKnown RBP16.76■□□□□ 0.27
TUBB3-211ENST00000556536 ASXL3Q9C0F0 2248 aa16.76■□□□□ 0.27
TUBB3-211ENST00000556536 TLCD2A6NGC4 264 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 SLC9B1P1A6NJY1 282 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms