RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 SH3BP4Q9P0V3 963 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 HCN3Q9P1Z3 774 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 RCOR3Q9P2K3 495 aaPredicted RBP5.06□□□□□ -1.6
SRP54-211ENST00000556445 ZMAT5Q9UDW3 170 aaKnown RBP5.06□□□□□ -1.6
SRP54-211ENST00000556445 HMGXB4Q9UGU5 601 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 CYTH4Q9UIA0 394 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 PTBP2Q9UKA9 531 aaKnown RBP5.06□□□□□ -1.6
SRP54-211ENST00000556445 PADI3Q9ULW8 664 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 SNX24Q9Y343 169 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 CAB39Q9Y376 341 aaPredicted RBP5.06□□□□□ -1.6
SRP54-211ENST00000556445 PTRH2Q9Y3E5 179 aaKnown RBP5.06□□□□□ -1.6
SRP54-211ENST00000556445 ADAM18Q9Y3Q7 739 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 PLEKHM1Q9Y4G2 1056 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 RAD54BQ9Y620 910 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 SESN1Q9Y6P5 492 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 TDRD15B5MCY1 1934 aaKnown RBP5.05□□□□□ -1.6
SRP54-211ENST00000556445 TRBC2A0A5B9 178 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ARL5CA6NH57 179 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 FAM90A7PA6NKC0 464 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 FAM90A22PA8MWA6 464 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 FAM90A12PA8MX19 464 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 FAM90A23PA8MXZ1 464 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 H7C4K7 107 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 TMEM189-UBE2V1I3L0A0 370 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 DNALI1O14645 258 aaPredicted RBP5.05□□□□□ -1.6
SRP54-211ENST00000556445 PPEF2O14830 753 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 PRPF4O43172 522 aaKnown RBP eCLIP5.05□□□□□ -1.6
SRP54-211ENST00000556445 VEGFDO43915 354 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 CST8O60676 142 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 PROP1O75360 226 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 DAB1O75553 588 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 SIX3O95343 332 aaPredicted RBP5.05□□□□□ -1.6
SRP54-211ENST00000556445 C1RP00736 705 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 AGTP01019 485 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ABCB1P08183 1280 aaPredicted RBP5.05□□□□□ -1.6
SRP54-211ENST00000556445 GHRP10912 638 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ZNF37AP17032 561 aaPredicted RBP5.05□□□□□ -1.6
SRP54-211ENST00000556445 WT1P19544 449 aaPredicted RBP5.05□□□□□ -1.6
SRP54-211ENST00000556445 ITGALP20701 1170 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 PRKCHP24723 683 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ITPKBP27987 946 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ADORA2BP29275 332 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 CCND3P30281 292 aaPredicted RBP5.05□□□□□ -1.6
SRP54-211ENST00000556445 AVPR2P30518 371 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 CD52P31358 61 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 MATKP42679 507 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 SLC15A1P46059 708 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 CCR10P46092 362 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 KCNJ1P48048 391 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ARCN1P48444 511 aaKnown RBP5.05□□□□□ -1.6
SRP54-211ENST00000556445 CAMLGP49069 296 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 NR2C2P49116 596 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 RGS7P49802 495 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 CDH6P55285 790 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ACTR1AP61163 376 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 YWHAZP63104 245 aaKnown RBP5.05□□□□□ -1.6
SRP54-211ENST00000556445 MRPS21P82921 87 aaKnown RBP5.05□□□□□ -1.6
SRP54-211ENST00000556445 ARF5P84085 180 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 OGDHQ02218 1023 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 SF3A3Q12874 501 aaKnown RBP eCLIP5.05□□□□□ -1.6
SRP54-211ENST00000556445 XRCC4Q13426 336 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 SNX1Q13596 522 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 LPIN1Q14693 890 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 KCNAB1Q14722 419 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 INAQ16352 499 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 MYLK3Q32MK0 819 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 SLC25A52Q3SY17 297 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 KRT71Q3SY84 523 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ANKRD20A4Q4UJ75 823 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ANKRD20A8PQ5CZ79 823 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ANKRD20A2Q5SQ80 823 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 CEP85LQ5SZL2 805 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ANKRD20A1Q5TYW2 823 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ANKRD20A3Q5VUR7 823 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 CST9LP1Q5W188 147 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 SLC25A24Q6NUK1 477 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 SLC24A5Q71RS6 500 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ERN2Q76MJ5 926 aaKnown RBP5.05□□□□□ -1.6
SRP54-211ENST00000556445 ZNF771Q7L3S4 317 aaPredicted RBP5.05□□□□□ -1.6
SRP54-211ENST00000556445 TAOK1Q7L7X3 1001 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ECHDC2Q86YB7 292 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 RFX6Q8HWS3 928 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 FBXW8Q8N3Y1 598 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 RIBC1Q8N443 379 aaPredicted RBP5.05□□□□□ -1.6
SRP54-211ENST00000556445 SFRP1Q8N474 314 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.05□□□□□ -1.6
SRP54-211ENST00000556445 ALLCQ8N6M5 410 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 EMC1Q8N766 993 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ZNF366Q8N895 744 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 C12orf29Q8N999 325 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 FAM46DQ8NEK8 389 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 CD99L2Q8TCZ2 262 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 SLC2A14Q8TDB8 520 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 FAM172AQ8WUF8 416 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 IRGQQ8WZA9 623 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 RAPGEF5Q92565 580 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 P3H4Q92791 437 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 APBB2Q92870 758 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 RFKQ969G6 155 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 TUBGCP3Q96CW5 907 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms