RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 LRRC40Q9H9A6 602 aa4.58□□□□□ -1.68
ATXN3-237ENST00000556274 LANCL2Q9NS86 450 aa4.58□□□□□ -1.68
ATXN3-237ENST00000556274 TMEM140Q9NV12 185 aa4.58□□□□□ -1.68
ATXN3-237ENST00000556274 HACD3Q9P035 362 aa4.58□□□□□ -1.68
ATXN3-237ENST00000556274 PADI4Q9UM07 663 aa4.58□□□□□ -1.68
ATXN3-237ENST00000556274 SUFUQ9UMX1 484 aa4.58□□□□□ -1.68
ATXN3-237ENST00000556274 DRG1Q9Y295 367 aaKnown RBP4.58□□□□□ -1.68
ATXN3-237ENST00000556274 DNAJC16Q9Y2G8 782 aa4.58□□□□□ -1.68
ATXN3-237ENST00000556274 PPIL1Q9Y3C6 166 aa4.58□□□□□ -1.68
ATXN3-237ENST00000556274 SPTBP11277 2137 aa4.58□□□□□ -1.68
ATXN3-237ENST00000556274 CFAP54Q96N23 3096 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 HEATR5BQ9P2D3 2071 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 GLYATL1P3A0A0U1RQE8 302 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 RGSL1A5PLK6 1076 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 OR2AG2A6NM03 316 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 RHPN2P1A8MT19 583 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 B5MCH6 92 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 PGRMC1O00264 195 aaKnown RBP4.57□□□□□ -1.68
ATXN3-237ENST00000556274 GRID2O43424 1007 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 ZNF189O75820 626 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-237ENST00000556274 CDK14O94921 469 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 EPOP01588 193 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 POLBP06746 335 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 ACP5P13686 325 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 ZNF8P17098 575 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-237ENST00000556274 TRIM23P36406 574 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 COILP38432 576 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-237ENST00000556274 SPAM1P38567 509 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 ACTR1BP42025 376 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 GRIA1P42261 906 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 KIAA1024LP59773 190 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 ACTR1AP61163 376 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 SARNPP82979 210 aaKnown RBP4.57□□□□□ -1.68
ATXN3-237ENST00000556274 PDE1BQ01064 536 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 DPTQ07507 201 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 TMEM115Q12893 351 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-237ENST00000556274 KRT33BQ14525 404 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 BRD3Q15059 726 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 TAF1AQ15573 450 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-237ENST00000556274 SMAD1Q15797 465 aaKnown RBP4.57□□□□□ -1.68
ATXN3-237ENST00000556274 ATP13A5Q4VNC0 1218 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 FNBP1LQ5T0N5 605 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 CERCAMQ5T4B2 595 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 KCTD16Q68DU8 428 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 TMEM220Q6QAJ8 160 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 RANBP10Q6VN20 620 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 SYT10Q6XYQ8 523 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 DOK3Q7L591 496 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 ZNF572Q7Z3I7 529 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-237ENST00000556274 TRAPPC5Q8IUR0 188 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 MIER2Q8N344 545 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 FSTL5Q8N475 847 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-237ENST00000556274 TRAM1L1Q8N609 369 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 GLIS1Q8NBF1 620 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 PPHLN1Q8NEY8 458 aaKnown RBP4.57□□□□□ -1.68
ATXN3-237ENST00000556274 OR13C4Q8NGS5 318 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 OR4C6Q8NH72 309 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 IFI44Q8TCB0 444 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 BRSK1Q8TDC3 778 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 NAT14Q8WUY8 206 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 EID2BQ96D98 161 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 SGF29Q96ES7 293 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 PDXPQ96GD0 296 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 PDLIM2Q96JY6 352 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 WDR24Q96S15 920 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 ZSCAN5AQ9BUG6 496 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 LRRC61Q9BV99 259 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 SCNM1Q9BWG6 230 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 TEX101Q9BY14 249 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 GSDMCQ9BYG8 508 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 TRIM31Q9BZY9 425 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 TRABDQ9H4I3 376 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 FGF22Q9HCT0 170 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 KLC4Q9NSK0 619 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 SPATS2LQ9NUQ6 558 aaKnown RBP4.57□□□□□ -1.68
ATXN3-237ENST00000556274 AURKAIP1Q9NWT8 199 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-237ENST00000556274 NLGN3Q9NZ94 848 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 PAK5Q9P286 719 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 LRIT1Q9P2V4 623 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 ATXN10Q9UBB4 475 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 FEZ2Q9UHY8 353 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-237ENST00000556274 CRLS1Q9UJA2 301 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 ANAPC5Q9UJX4 755 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 ANGPTL2Q9UKU9 493 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 PNMA8BQ9ULN7 279 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-237ENST00000556274 SNX12Q9UMY4 172 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 PSMD13Q9UNM6 376 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 CLCA2Q9UQC9 943 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 KCNK6Q9Y257 313 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 SAR1BQ9Y6B6 198 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 CSNK1G3Q9Y6M4 447 aa4.57□□□□□ -1.68
ATXN3-237ENST00000556274 DMXL1Q9Y485 3027 aa4.56□□□□□ -1.68
ATXN3-237ENST00000556274 MYO15AQ9UKN7 3530 aa4.56□□□□□ -1.68
ATXN3-237ENST00000556274 CCDC154A6NI56 674 aa4.56□□□□□ -1.68
ATXN3-237ENST00000556274 A8MU76 341 aa4.56□□□□□ -1.68
ATXN3-237ENST00000556274 PDZK1P1A8MUH7 402 aa4.56□□□□□ -1.68
ATXN3-237ENST00000556274 CXorf49A8MYA2 514 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-237ENST00000556274 LMO7DNF2Z398 122 aa4.56□□□□□ -1.68
ATXN3-237ENST00000556274 TPP1O14773 563 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms