RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 NECTIN1Q15223 517 aa2.67□□□□□ -1.98
SCFD1-218ENST00000556256 HYAL4Q2M3T9 481 aa2.67□□□□□ -1.98
SCFD1-218ENST00000556256 MDH1BQ5I0G3 518 aa2.67□□□□□ -1.98
SCFD1-218ENST00000556256 SLC16A9Q7RTY1 509 aa2.67□□□□□ -1.98
SCFD1-218ENST00000556256 TRIML1Q8N9V2 468 aa2.67□□□□□ -1.98
SCFD1-218ENST00000556256 TMEM178AQ8NBL3 297 aa2.67□□□□□ -1.98
SCFD1-218ENST00000556256 OR5M8Q8NGP6 311 aa2.67□□□□□ -1.98
SCFD1-218ENST00000556256 OLIG1Q8TAK6 271 aa2.67□□□□□ -1.98
SCFD1-218ENST00000556256 RNF128Q8TEB7 428 aa2.67□□□□□ -1.98
SCFD1-218ENST00000556256 SLAMF9Q96A28 289 aa2.67□□□□□ -1.98
SCFD1-218ENST00000556256 SLC25A23Q9BV35 468 aa2.67□□□□□ -1.98
SCFD1-218ENST00000556256 FNDC11Q9BVV2 318 aa2.67□□□□□ -1.98
SCFD1-218ENST00000556256 NUP85Q9BW27 656 aa2.67□□□□□ -1.98
SCFD1-218ENST00000556256 Q9N2K0 584 aa2.67□□□□□ -1.98
SCFD1-218ENST00000556256 ABT1Q9ULW3 272 aaKnown RBP2.67□□□□□ -1.98
SCFD1-218ENST00000556256 LIPGQ9Y5X9 500 aa2.67□□□□□ -1.98
SCFD1-218ENST00000556256 HYKKA2RU49 373 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 IPO8O15397 1037 aaKnown RBP2.66□□□□□ -1.98
SCFD1-218ENST00000556256 RNASEH1O60930 286 aaKnown RBP2.66□□□□□ -1.98
SCFD1-218ENST00000556256 IGHV2-70P01814 119 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 GLULP15104 373 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 IFNAR1P17181 557 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 CKMT2P17540 419 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 PTAFRP25105 342 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 SLC6A6P31641 620 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 PSMC4P43686 418 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 SLC9A3P48764 834 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 ZNF75DP51815 510 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 ACSM1Q08AH1 577 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 TFCP2Q12800 502 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 CAMK2DQ13557 499 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 HNRNPDQ14103 355 aaKnown RBP2.66□□□□□ -1.98
SCFD1-218ENST00000556256 PSMD6Q15008 389 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 TEAD2Q15562 447 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 DMKNQ6E0U4 476 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-218ENST00000556256 IL27RAQ6UWB1 636 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 Q6ZVH6 145 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 RAPH1Q70E73 1250 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 TMPRSS11BQ86T26 416 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 PLD3Q8IV08 490 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 FGFRL1Q8N441 504 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 OR2T12Q8NG77 320 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 DHX58Q96C10 678 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 SLC47A1Q96FL8 570 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 SEPHS2Q99611 448 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 OPA3Q9H6K4 179 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 MYNNQ9NPC7 610 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 RNF186Q9NXI6 227 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 DPP3Q9NY33 737 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 COQ3Q9NZJ6 369 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 B3GAT1Q9P2W7 334 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 SLC24A2Q9UI40 661 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 ZDHHC2Q9UIJ5 367 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 MTUS1Q9ULD2 1270 aa2.66□□□□□ -1.98
SCFD1-218ENST00000556256 IGHV4-61A0A0C4DH41 118 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 MEX3AA1L020 520 aaKnown RBP2.65□□□□□ -1.99
SCFD1-218ENST00000556256 NEMP2A6NFY4 417 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 E9PI62 339 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 GAPDHSO14556 408 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-218ENST00000556256 HSPA4LO95757 839 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 IGHV4-59P01825 116 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 ATP5BP06576 529 aaKnown RBP2.65□□□□□ -1.99
SCFD1-218ENST00000556256 OR52Z1P0C646 297 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 ITIH1P19827 911 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 ASCL1P50553 236 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 TPD52P55327 224 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-218ENST00000556256 B3GALT5-AS1P59052 145 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 POLR2LP62875 67 aaKnown RBP2.65□□□□□ -1.99
SCFD1-218ENST00000556256 ROR1Q01973 937 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 RBPJQ06330 500 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 ZNF273Q14593 569 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 SYT14P1Q58G82 188 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 CYP4A22Q5TCH4 519 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 ARMC3Q5W041 872 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 PSRC1Q6PGN9 363 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-218ENST00000556256 TRAT1Q6PIZ9 186 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 ERN2Q76MJ5 926 aaKnown RBP2.65□□□□□ -1.99
SCFD1-218ENST00000556256 FAM114A1Q8IWE2 563 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 ARHGAP24Q8N264 748 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 CAMKVQ8NCB2 501 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 PPFIBP2Q8ND30 876 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 NPEPL1Q8NDH3 523 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 PRSS33Q8NF86 280 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 OR13J1Q8NGT2 312 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 KIF18AQ8NI77 898 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 ROBO4Q8WZ75 1007 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 HSD17B8Q92506 261 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 SFXN2Q96NB2 322 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 FEVQ99581 238 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 FAM129AQ9BZQ8 928 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 UPF3AQ9H1J1 476 aaKnown RBP2.65□□□□□ -1.99
SCFD1-218ENST00000556256 P2RY12Q9H244 342 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 FZD8Q9H461 694 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 SERINC1Q9NRX5 453 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 PADI2Q9Y2J8 665 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 PCDH11YQ9BZA8 1340 aa2.65□□□□□ -1.99
SCFD1-218ENST00000556256 A0A087WV48 116 aa2.64□□□□□ -1.99
SCFD1-218ENST00000556256 A0A1W2PPK0 400 aa2.64□□□□□ -1.99
SCFD1-218ENST00000556256 A0A1W2PRB8 838 aa2.64□□□□□ -1.99
SCFD1-218ENST00000556256 A0A1W2PRQ8 180 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms