RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 HSPA7P48741 367 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 ACY1Q03154 408 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 CFHR1Q03591 330 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 FASTKQ14296 549 aaKnown RBP7.36□□□□□ -1.23
TDP1-214ENST00000556063 SETDB1Q15047 1291 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 PCBP2Q15366 365 aaKnown RBP eCLIP7.36□□□□□ -1.237e-11■■■■■ 50.5
TDP1-214ENST00000556063 HSP90B2PQ58FF3 399 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 TNFAIP8L3Q5GJ75 292 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 ZC3H12BQ5HYM0 836 aaKnown RBP7.36□□□□□ -1.23
TDP1-214ENST00000556063 C16orf46Q6P387 395 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 ZNF574Q6ZN55 896 aaPredicted RBP7.36□□□□□ -1.23
TDP1-214ENST00000556063 TMPRSS7Q7RTY8 843 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 ARHGAP22Q7Z5H3 698 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 ADCK2Q7Z695 626 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 EXOC3L1Q86VI1 746 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 THOC6Q86W42 341 aaKnown RBP7.36□□□□□ -1.23
TDP1-214ENST00000556063 BPHLQ86WA6 291 aaPredicted RBP7.36□□□□□ -1.23
TDP1-214ENST00000556063 SLITRK4Q8IW52 837 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 KLHDC8AQ8IYD2 350 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 LRRC56Q8IYG6 542 aaPredicted RBP7.36□□□□□ -1.23
TDP1-214ENST00000556063 PTGR2Q8N8N7 351 aaPredicted RBP7.36□□□□□ -1.23
TDP1-214ENST00000556063 SNX31Q8N9S9 440 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 PPFIBP2Q8ND30 876 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 OR2A1Q8NGT9 310 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 WDR36Q8NI36 951 aaKnown RBP7.36□□□□□ -1.23
TDP1-214ENST00000556063 UBTD2Q8WUN7 234 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 KLHL6Q8WZ60 621 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 N4BP2L2Q92802 583 aaPredicted RBP7.36□□□□□ -1.23
TDP1-214ENST00000556063 PYCR2Q96C36 320 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 TCTN2Q96GX1 697 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 LIN37Q96GY3 246 aaPredicted RBP7.36□□□□□ -1.23
TDP1-214ENST00000556063 ATP6V1G3Q96LB4 118 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 CD244Q9BZW8 370 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 TWSG1Q9GZX9 223 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 CHRNA10Q9GZZ6 450 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 FANCEQ9HB96 536 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 PDE7BQ9NP56 450 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 KCNK9Q9NPC2 374 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 TMEM184CQ9NVA4 438 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 NKIRAS1Q9NYS0 192 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 GPRC5BQ9NZH0 403 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 SEMA5BQ9P283 1151 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 SLC22A14Q9Y267 594 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 PLLPQ9Y342 182 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 AHCTF1Q8WYP5 2266 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 A0A1W2PPV9 198 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 KRT87PA6NCN2 255 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 HMGB1P1B2RPK0 211 aaPredicted RBP7.35□□□□□ -1.23
TDP1-214ENST00000556063 K7EPI3 171 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 TAPBPO15533 448 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 KIF1CO43896 1103 aaKnown RBP7.35□□□□□ -1.23
TDP1-214ENST00000556063 SPAG7O75391 227 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 TOP3BO95985 862 aaKnown RBP7.35□□□□□ -1.23
TDP1-214ENST00000556063 PROCP04070 461 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 JMJD7P0C870 316 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 NEFHP12036 1026 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 ST6GAL1P15907 406 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 EPB42P16452 691 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 NPPBP16860 134 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 NELFEP18615 380 aaKnown RBP7.35□□□□□ -1.23
TDP1-214ENST00000556063 MAGP20916 626 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 PEBP1P30086 187 aaKnown RBP7.35□□□□□ -1.23
TDP1-214ENST00000556063 MLLT3P42568 568 aaPredicted RBP7.35□□□□□ -1.23
TDP1-214ENST00000556063 SLC6A12P48065 614 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 SEPHS1P49903 392 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 CCR8P51685 355 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 SLC18A1P54219 525 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 PRKAA2P54646 552 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 MAGOHP61326 146 aaKnown RBP7.35□□□□□ -1.23
TDP1-214ENST00000556063 PPP1CAP62136 330 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 NFKB2Q00653 900 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 RELAQ04206 551 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 FOXC1Q12948 553 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 CDC16Q13042 620 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 TARDBPQ13148 414 aaKnown RBP eCLIP7.35□□□□□ -1.23
TDP1-214ENST00000556063 PDK4Q16654 411 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 PAGE2BQ5JRK9 111 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 CFAP157Q5JU67 520 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 TMEM164Q5U3C3 297 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 FIGLAQ6QHK4 219 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 ZYG11AQ6WRX3 759 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 CDHR3Q6ZTQ4 885 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 RAB11FIP2Q7L804 512 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 B3GNT8Q7Z7M8 397 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 TRIM73Q86UV7 250 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 FAM129CQ86XR2 697 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 HOMEZQ8IX15 550 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 CHCHD4Q8N4Q1 142 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 C19orf47Q8N9M1 422 aaKnown RBP7.35□□□□□ -1.23
TDP1-214ENST00000556063 ARMC2Q8NEN0 867 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 OR8K5Q8NH50 307 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 TCP10LQ8TDR4 215 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 SLC5A11Q8WWX8 675 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 ATP6V1E2Q96A05 226 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 TLCD1Q96CP7 247 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 PHF21BQ96EK2 531 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 THAP11Q96EK4 314 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 SLC41A2Q96JW4 573 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 MAGEB10Q96LZ2 347 aaPredicted RBP7.35□□□□□ -1.23
TDP1-214ENST00000556063 FAM111AQ96PZ2 611 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms