RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ZNF510Q9Y2H8 683 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 TDRKHQ9Y2W6 561 aaKnown RBP6.81□□□□□ -1.32
TDP1-213ENST00000555880 CPQQ9Y646 472 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 HSPE1-MOB4S4R3N1 261 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 TET1Q8NFU7 2136 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 NPIPB15A6NHN6 443 aaPredicted RBP6.8□□□□□ -1.32
TDP1-213ENST00000555880 M0R3G1 203 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 FPGTO14772 594 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 KPNA5O15131 536 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 SLC22A1O15245 554 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 SLC16A5O15375 505 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 PRMT3O60678 531 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 NDUFS2O75306 463 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 MYO1DO94832 1006 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 LRATO95237 230 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 AVPP01185 164 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 FABP3P05413 133 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 CKMP06732 381 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 HTR1AP08908 422 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 TFPTP0C1Z6 253 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 SDC1P18827 310 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 PRKACGP22612 351 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 GKP32189 559 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 HALP42357 657 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 MAGEA2P43356 314 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 AP1S2P56377 157 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 ISL1P61371 349 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 SRSF11Q05519 484 aaKnown RBP6.8□□□□□ -1.32
TDP1-213ENST00000555880 HSPA14Q0VDF9 509 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 PPP1R8Q12972 351 aaKnown RBP6.8□□□□□ -1.32
TDP1-213ENST00000555880 ATP1A4Q13733 1029 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 KEAP1Q14145 624 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 ZNF846Q147U1 533 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 ACOX1Q15067 660 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 CDKN3Q16667 212 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 DUOXA1Q1HG43 343 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 ANKDD1AQ495B1 522 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 MPPE1Q53F39 396 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 SLC44A4Q53GD3 710 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 MPP7Q5T2T1 576 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 FRG2Q64ET8 278 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 CPZQ66K79 652 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 LRRC66Q68CR7 880 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 ZCCHC8Q6NZY4 707 aaKnown RBP6.8□□□□□ -1.32
TDP1-213ENST00000555880 CRTC1Q6UUV9 634 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 DCDC5Q6ZRR9 648 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 GALNT5Q7Z7M9 940 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 RBM23Q86U06 439 aaKnown RBP6.8□□□□□ -1.32
TDP1-213ENST00000555880 TSPAN33Q86UF1 283 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 ANKRD13BQ86YJ7 626 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 SYT12Q8IV01 421 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 CRIPAKQ8N1N5 446 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 SVOPQ8N4V2 548 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 SLC15A4Q8N697 577 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 TMCO5AQ8N6Q1 288 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 ARL14EPQ8N8R7 260 aaPredicted RBP6.8□□□□□ -1.32
TDP1-213ENST00000555880 GPR26Q8NDV2 337 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 OR7A2PQ8NGA2 310 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 MCOLN3Q8TDD5 553 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 FRS2Q8WU20 508 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 CHPT1Q8WUD6 406 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 S100ZQ8WXG8 99 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 TBC1D20Q96BZ9 403 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 SCRN2Q96FV2 425 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 APOLD1Q96LR9 279 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 ZNF641Q96N77 438 aaPredicted RBP6.8□□□□□ -1.32
TDP1-213ENST00000555880 FRG2BQ96QU4 278 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 PANX1Q96RD7 426 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 INPP5KQ9BT40 448 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 SLC12A9Q9BXP2 914 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 EMILIN2Q9BXX0 1053 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 WDR12Q9GZL7 423 aaKnown RBP6.8□□□□□ -1.32
TDP1-213ENST00000555880 CCNB1IP1Q9NPC3 277 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 SLC6A13Q9NSD5 602 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 ABCB8Q9NUT2 735 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 TMEFF2Q9UIK5 374 aaPredicted RBP6.8□□□□□ -1.32
TDP1-213ENST00000555880 ERVW-1Q9UQF0 538 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 COQ6Q9Y2Z9 468 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 SH3GLB1Q9Y371 365 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 SH3BP1Q9Y3L3 701 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 NAALAD2Q9Y3Q0 740 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 PLXNB3Q9ULL4 1909 aa6.8□□□□□ -1.32
TDP1-213ENST00000555880 AGAP14A8MT82 685 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 CLDN25C9JDP6 229 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 J3QRK9 145 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 M0QX08 132 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 KPNA4O00629 521 aaPredicted RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 AREL1O15033 823 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 BNIP3LO60238 219 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 NUAK1O60285 661 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 BCAS1O75363 584 aaPredicted RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 MYCP01106 439 aaPredicted RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 FTH1P02794 183 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 SOD2P04179 222 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 URODP06132 367 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 MPC1LP0DKB6 136 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 IMPDH2P12268 514 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 JUNDP17535 347 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 PFKLP17858 780 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 AGXTP21549 392 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms