RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 OR2I1PQ8NGU4 316 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 AGR3Q8TD06 166 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 RHBDD1Q8TEB9 315 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 CCDC74AQ96AQ1 378 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 CNDP2Q96KP4 475 aaKnown RBP10.82□□□□□ -0.68
SHMT2-220ENST00000555634 CD180Q99467 661 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 AIF1LQ9BQI0 150 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 CENPKQ9BS16 269 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 ACAT2Q9BWD1 397 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 TRIM55Q9BYV6 548 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 SLC29A3Q9BZD2 475 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 PITHD1Q9GZP4 211 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-220ENST00000555634 GSTO2Q9H4Y5 243 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 ELOVL6Q9H5J4 265 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 PELI2Q9HAT8 420 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 HRASLS2Q9NWW9 162 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 ACTR10Q9NZ32 417 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 VTI1BQ9UEU0 232 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 TRPS1Q9UHF7 1281 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 ADAM21Q9UKJ8 722 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 RNF215Q9Y6U7 377 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 HEATR5BQ9P2D3 2071 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 A0A0J9YY10 115 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 KRT87PA6NCN2 255 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 SRRM3A6NNA2 597 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-220ENST00000555634 TAPBPO15533 448 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 SNNO75324 88 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-220ENST00000555634 RASSF9O75901 435 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 CKMT1AP12532 417 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 TYRP1P17643 537 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 POLR2CP19387 275 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-220ENST00000555634 CDH3P22223 829 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 GSTM2P28161 218 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 GDF5P43026 501 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 RPL14P50914 215 aaKnown RBP10.81□□□□□ -0.68
SHMT2-220ENST00000555634 GYS2P54840 703 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 CDH13P55290 713 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 GRB7Q14451 532 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 CLPPQ16740 277 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-220ENST00000555634 SLC5A12Q1EHB4 618 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 GGTA1PQ4G0N0 100 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 UNC50Q53HI1 259 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 FBXO48Q5FWF7 155 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 ATG9BQ674R7 924 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 CYB5D1Q6P9G0 228 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 SPESP1Q6UW49 350 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 KANSL1Q7Z3B3 1105 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 C17orf82Q86X59 251 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-220ENST00000555634 SPNS2Q8IVW8 549 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 CARFQ8N187 725 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 C2orf73Q8N5S3 287 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-220ENST00000555634 ZNF655Q8N720 491 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-220ENST00000555634 TTLQ8NG68 377 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 PIWIL2Q8TC59 973 aaKnown RBP10.81□□□□□ -0.68
SHMT2-220ENST00000555634 AGAP11Q8TF27 550 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 N4BP2L2Q92802 583 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-220ENST00000555634 ESAMQ96AP7 390 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 CCT7Q99832 543 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 TBC1D10AQ9BXI6 508 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 FAM107BQ9H098 131 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 ABCG4Q9H172 646 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 SNX7Q9UNH6 387 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 FIS1Q9Y3D6 152 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 PCDHGA11Q9Y5H2 935 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 KNL1Q8NG31 2342 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 CACNA1HO95180 2353 aa10.81□□□□□ -0.68
SHMT2-220ENST00000555634 GOLGA4Q13439 2230 aaKnown RBP10.8□□□□□ -0.68
SHMT2-220ENST00000555634 CABIN1Q9Y6J0 2220 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 GMNCA6NCL1 334 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 TLCD2A6NGC4 264 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 E7EQ34 232 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 PROB1E7EW31 1015 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 TRIM38O00635 465 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 AZIN1O14977 448 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 EDF1O60869 148 aaKnown RBP10.8□□□□□ -0.68
SHMT2-220ENST00000555634 GP1BAP07359 652 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 UROSP10746 265 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 CDH1P12830 882 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 EZRP15311 586 aaKnown RBP10.8□□□□□ -0.68
SHMT2-220ENST00000555634 UGT2B7P16662 529 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 CKMT2P17540 419 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 ZNF33BQ06732 778 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 PRDX1Q06830 199 aaKnown RBP10.8□□□□□ -0.68
SHMT2-220ENST00000555634 CHIT1Q13231 466 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 FASTKQ14296 549 aaKnown RBP10.8□□□□□ -0.68
SHMT2-220ENST00000555634 NR1D2Q14995 579 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 TBCCQ15814 346 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 IMPG1Q17R60 797 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 C18orf21Q32NC0 220 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-220ENST00000555634 GRHL2Q6ISB3 625 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 MED27Q6P2C8 311 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 SPRED1Q7Z699 444 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 ZNF761Q86XN6 746 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-220ENST00000555634 DDIASQ8IXT1 998 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 ADGRF3Q8IZF5 1079 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 Q8N9G6 341 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-220ENST00000555634 LMNTD1Q8N9Z9 388 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 LINC01555Q8NAE3 123 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 OR2L3Q8NG85 312 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 IFI44Q8TCB0 444 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms