RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 ZNF358Q9NW07 568 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 TAS2R13Q9NYV9 303 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 METRNQ9UJH8 293 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 CDYLQ9Y232 598 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 PCDHGA1Q9Y5H4 931 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 HEBP2Q9Y5Z4 205 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 COLEC10Q9Y6Z7 277 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 IGHV1OR21-1A0A087WYE8 117 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 A0A1W2PQM1 296 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 A8MU76 341 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 TARM1B6A8C7 271 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 MATN2O00339 956 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 KPNA5O15131 536 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 HDAC3O15379 428 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 NPHS1O60500 1241 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 FKBP6O75344 327 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 GPC4O75487 556 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 UBXN7O94888 489 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 GP1BAP07359 652 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 ACADSP16219 412 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 CD1CP29017 333 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 CPOXP36551 454 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 RPL14P50914 215 aaKnown RBP9.56□□□□□ -0.88
PSEN1-213ENST00000555386 ADARP55265 1226 aaKnown RBP9.56□□□□□ -0.88
PSEN1-213ENST00000555386 DNAJB13P59910 316 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 ACTR3P61158 418 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 MXRA7P84157 204 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 E2F1Q01094 437 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 ILKQ13418 452 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 UBAP2LQ14157 1087 aaKnown RBP9.56□□□□□ -0.88
PSEN1-213ENST00000555386 TAF11Q15544 211 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 TTLL9Q3SXZ7 439 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 PLEKHS1Q5SXH7 462 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 PHF19Q5T6S3 580 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 LRRC8EQ6NSJ5 796 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 PAQR3Q6TCH7 311 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 PIWIL4Q7Z3Z4 852 aaKnown RBP9.56□□□□□ -0.88
PSEN1-213ENST00000555386 ZNF438Q7Z4V0 828 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 SLC22A15Q8IZD6 547 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 TMEM151AQ8N4L1 468 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 ZNF781Q8N8C0 355 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 LMNTD1Q8N9Z9 388 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 CD200R1Q8TD46 325 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 N4BP2L2Q92802 583 aaPredicted RBP9.56□□□□□ -0.88
PSEN1-213ENST00000555386 CCDC126Q96EE4 140 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 TSPAN17Q96FV3 270 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 NAF1Q96HR8 494 aaKnown RBP9.56□□□□□ -0.88
PSEN1-213ENST00000555386 CNDP1Q96KN2 507 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 ZNF570Q96NI8 536 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 TGM7Q96PF1 710 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 MRPL57Q9BQC6 102 aaKnown RBP9.56□□□□□ -0.88
PSEN1-213ENST00000555386 CCDC28BQ9BUN5 200 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 UNKQ9C0B0 810 aaKnown RBP9.56□□□□□ -0.88
PSEN1-213ENST00000555386 MRPL46Q9H2W6 279 aaKnown RBP9.56□□□□□ -0.88
PSEN1-213ENST00000555386 TRIT1Q9H3H1 467 aaKnown RBP9.56□□□□□ -0.88
PSEN1-213ENST00000555386 LATS2Q9NRM7 1088 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 TMEM9Q9P0T7 183 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 ANGPTL2Q9UKU9 493 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 MED16Q9Y2X0 877 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 VWA7Q9Y334 891 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 COMMD10Q9Y6G5 202 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 ASPMQ8IZT6 3477 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 AKAP13Q12802 2813 aa9.56□□□□□ -0.88
PSEN1-213ENST00000555386 SPTBP11277 2137 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 GOLGA8QA0A0J9YX86 632 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 MED19A0JLT2 244 aaPredicted RBP9.55□□□□□ -0.88
PSEN1-213ENST00000555386 GOLGA8OA6NCC3 632 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 OR6C74A6NCV1 312 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 GOLGA8NF8WBI6 632 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 ZW10O43264 779 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 DUX1O43812 170 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 CCNT2O60583 730 aaKnown RBP9.55□□□□□ -0.88
PSEN1-213ENST00000555386 CSO75390 466 aaKnown RBP9.55□□□□□ -0.88
PSEN1-213ENST00000555386 SLCO2B1O94956 709 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 MT-CO3P00414 261 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 PROS1P07225 676 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 HOXB3P14651 431 aaPredicted RBP9.55□□□□□ -0.88
PSEN1-213ENST00000555386 ATP6V1C1P21283 382 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 ACADLP28330 430 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 GMPRP36959 345 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 SLC26A3P40879 764 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 GPR3P46089 330 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 CPA2P48052 419 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 TAS2R39P59534 338 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 TIAL1Q01085 375 aaKnown RBP eCLIP9.55□□□□□ -0.88
PSEN1-213ENST00000555386 PLOD1Q02809 727 aaPredicted RBP9.55□□□□□ -0.88
PSEN1-213ENST00000555386 BTKQ06187 659 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 TARDBPQ13148 414 aaKnown RBP eCLIP9.55□□□□□ -0.88
PSEN1-213ENST00000555386 TSTA3Q13630 321 aaPredicted RBP9.55□□□□□ -0.88
PSEN1-213ENST00000555386 NAA25Q14CX7 972 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 RCN1Q15293 331 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 FAM45BPQ6NSW5 357 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 UGT3A1Q6NUS8 523 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 IRGCQ6NXR0 463 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 AAGABQ6PD74 315 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 ATG14Q6ZNE5 492 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 RBM44Q6ZP01 1051 aaKnown RBP9.55□□□□□ -0.88
PSEN1-213ENST00000555386 TMPRSS9Q7Z410 1059 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 B3GNT8Q7Z7M8 397 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 CENPLQ8N0S6 344 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms