RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 PLP2Q04941 152 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 ZACNQ401N2 412 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 ZNF283Q8N7M2 679 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 SUN5Q8TC36 379 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 TMEM203Q969S6 136 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 AZIN2Q96A70 460 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 CLTCL1P53675 1640 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 ZNF536O15090 1300 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 RIMS1Q86UR5 1692 aaKnown RBP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 CIB4A0PJX0 185 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 ANGPTL1O95841 491 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 HRGP04196 525 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 TMEM11P17152 192 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 CHMP24386 653 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 HNF1BP35680 557 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 LEPRP48357 1165 aaKnown RBP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 MRPS5P82675 430 aaKnown RBP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 CBLBQ13191 982 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 SCARB2Q14108 478 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 MFSD13AQ14CX5 517 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 DECR1Q16698 335 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 PARP15Q460N3 678 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 MON1AQ86VX9 555 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 NLGN4XQ8N0W4 816 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 LPGAT1Q92604 370 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 ARL5BQ96KC2 179 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 EPYCQ99645 322 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 PLEKHA3Q9HB20 300 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 CFL2Q9Y281 166 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 MYO3AQ8NEV4 1616 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 ZNF670-ZNF695F2Z2N8 137 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 TOR1BO14657 336 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 TNFSF12O43508 249 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 MPZL2O60487 215 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 SERPINA6P08185 405 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 HOXC6P09630 235 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 PDK4Q16654 411 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 FAM174BQ3ZCQ3 159 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 HMCESQ96FZ2 354 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 CMKLR1Q99788 373 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 RNPEPL1Q9HAU8 725 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 CDC42BPAQ5VT25 1732 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 BBIP1A8MTZ0 92 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 ERI3O43414 337 aaKnown RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 FAM155BO75949 473 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 ZNF14P17017 642 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 MARCKSL1P49006 195 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 FLT3LGP49771 235 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 CHADLQ6NUI6 762 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 CYP2U1Q7Z449 544 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 MMAAQ8IVH4 418 aaKnown RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 EZH1Q92800 747 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 ZBED6CLQ96FA7 236 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 RTFDC1Q9BY42 306 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 CLUHO75153 1309 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 FAM155AB1AL88 458 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 MMP3P08254 477 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 PKMP14618 531 aaKnown RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 BDKRB1P46663 353 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 CRYBB1P53674 252 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 NIPAL4Q0D2K0 466 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 TBRG1Q3YBR2 411 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 ZNF598Q86UK7 904 aaKnown RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 SLC6A7Q99884 636 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 MND1Q9BWT6 205 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 ZNF451Q9Y4E5 1061 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 KLRG2A4D1S0 409 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 NDST3O95803 873 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 MRPL49Q13405 166 aaKnown RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 SERPINA9Q86WD7 417 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 OR5AK3PQ8NH89 298 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 RGMAQ96B86 450 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 MMABQ96EY8 250 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 OR51B6Q9H340 312 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 CORO1CQ9ULV4 474 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 PCDHB1Q9Y5F3 818 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 GSTM2P28161 218 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 RPL5P46777 297 aaKnown RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 GABRB2P47870 512 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 LUMP51884 338 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 WSCD2Q2TBF2 565 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 UBE2UQ5VVX9 321 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 ZPBP2Q6X784 338 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 ARCQ7LC44 396 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 LRRC58Q96CX6 371 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 HSPBAP1Q96EW2 488 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 SHDQ96IW2 340 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 MAGEE1Q9HCI5 957 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 MAN2C1Q9NTJ4 1040 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 B4GALT7Q9UBV7 327 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 IL20RAQ9UHF4 553 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 PCDHB14Q9Y5E9 798 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 SPATA31A6Q5VVP1 1343 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 CXCR6O00574 342 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 CDC123O75794 336 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 SPARCP09486 303 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 SYN1P17600 705 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 GLYATQ6IB77 296 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 PDE12Q6L8Q7 609 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms