RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 ASPMQ8IZT6 3477 aa16.89■□□□□ 0.29
SHOX-204ENST00000554971 TRBV5-4A0A0C4DH59 114 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 ATP6AP2A0A1C7CYW4 349 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 ATP6AP2O75787 350 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 CEACAM5P06731 702 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 HGFP14210 728 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 MSX2P35548 267 aaPredicted RBP16.88■□□□□ 0.29
SHOX-204ENST00000554971 C21orf59P57076 290 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 IL23RQ5VWK5 629 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 BLOC1S3Q6QNY0 202 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 DDIASQ8IXT1 998 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 NAT14Q8WUY8 206 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 EXT2Q93063 718 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 EME1Q96AY2 570 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 ZNF597Q96LX8 424 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 OSBPL11Q9BXB4 747 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 TRIM54Q9BYV2 358 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 TCEAL2Q9H3H9 227 aaPredicted RBP16.88■□□□□ 0.29
SHOX-204ENST00000554971 PHPT1Q9NRX4 125 aaPredicted RBP16.88■□□□□ 0.29
SHOX-204ENST00000554971 RIC8BQ9NVN3 520 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 POLG2Q9UHN1 485 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 TMEM98Q9Y2Y6 226 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 TNPO3Q9Y5L0 923 aaKnown RBP16.88■□□□□ 0.29
SHOX-204ENST00000554971 CACNB4O00305 520 aaPredicted RBP16.88■□□□□ 0.29
SHOX-204ENST00000554971 SLC25A14O95258 325 aaPredicted RBP16.88■□□□□ 0.29
SHOX-204ENST00000554971 ZNF26P17031 533 aaPredicted RBP16.88■□□□□ 0.29
SHOX-204ENST00000554971 TSPAN8P19075 237 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 TCN1P20061 433 aaPredicted RBP16.88■□□□□ 0.29
SHOX-204ENST00000554971 RPL5P46777 297 aaKnown RBP16.88■□□□□ 0.29
SHOX-204ENST00000554971 ROR2Q01974 943 aaKnown RBP16.88■□□□□ 0.29
SHOX-204ENST00000554971 CACNG1Q06432 222 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 SHBQ15464 509 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 HLA-BQ31612 363 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 SNX20Q7Z614 316 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 PARGQ86W56 976 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 PACRGLQ8N7B6 248 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 OR1E3Q8WZA6 343 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 TSACCQ96A04 125 aaPredicted RBP16.88■□□□□ 0.29
SHOX-204ENST00000554971 TUBB1Q9H4B7 451 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 NUDT4Q9NZJ9 180 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 MAP10Q9P2G4 905 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 SLC17A4Q9Y2C5 497 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 GPR45Q9Y5Y3 372 aa16.88■□□□□ 0.29
SHOX-204ENST00000554971 ASXL3Q9C0F0 2248 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 CDX4O14627 284 aaPredicted RBP16.87■□□□□ 0.29
SHOX-204ENST00000554971 SNX2O60749 519 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 TSPAN12O95859 305 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 BMP2P12643 396 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 SLC7A2P52569 658 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 B4GALNT1Q00973 533 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 TSNQ15631 228 aaKnown RBP16.87■□□□□ 0.29
SHOX-204ENST00000554971 ALG11Q2TAA5 492 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 XKR7Q5GH72 579 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 C6orf10Q5SRN2 563 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 GPRC6AQ5T6X5 926 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 ENPP7Q6UWV6 458 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 PRR23CQ6ZRP0 262 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 GPSM1Q86YR5 675 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 DCP2Q8IU60 420 aaKnown RBP16.87■□□□□ 0.29
SHOX-204ENST00000554971 ANKFN1Q8N957 763 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 DDHD1Q8NEL9 900 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 ATP6V1E2Q96A05 226 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 WDR92Q96MX6 357 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 ZNF382Q96SR6 550 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 MRPS26Q9BYN8 205 aaKnown RBP16.87■□□□□ 0.29
SHOX-204ENST00000554971 BRINP2Q9C0B6 783 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 PCTPQ9UKL6 214 aa16.87■□□□□ 0.29
SHOX-204ENST00000554971 A0A1W2PP18 115 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 BTN3A1O00481 513 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 HNRNPRO43390 633 aaKnown RBP16.86■□□□□ 0.29
SHOX-204ENST00000554971 GDF9O60383 454 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 FAM58BPP0C7Q3 252 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 CALRP27797 417 aaKnown RBP16.86■□□□□ 0.29
SHOX-204ENST00000554971 PDCD4Q53EL6 469 aaKnown RBP16.86■□□□□ 0.29
SHOX-204ENST00000554971 DOK6Q6PKX4 331 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 RETREG3Q86VR2 466 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 RBFAQ8N0V3 343 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 NXPE1Q8N323 547 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 OR9I1Q8NGQ6 314 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 NSUN5Q96P11 429 aaKnown RBP16.86■□□□□ 0.29
SHOX-204ENST00000554971 ELF4Q99607 663 aaPredicted RBP16.86■□□□□ 0.29
SHOX-204ENST00000554971 HGH1Q9BTY7 390 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 PCDHAC1Q9H158 963 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 ERVMER34-1Q9H9K5 563 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 CCM2LQ9NUG4 571 aaPredicted RBP16.86■□□□□ 0.29
SHOX-204ENST00000554971 AIG1Q9NVV5 245 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 ZIM2Q9NZV7 527 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 ATXN10Q9UBB4 475 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 ST14Q9Y5Y6 855 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 COMMD3-BMI1R4GMX3 469 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 PRSS38A1L453 326 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 IFRD1O00458 451 aaPredicted RBP16.86■□□□□ 0.29
SHOX-204ENST00000554971 NR5A2O00482 541 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 SCAMP1O15126 338 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 GFRA3O60609 400 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 CSF2P04141 144 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 NME1P15531 152 aaKnown RBP16.86■□□□□ 0.29
SHOX-204ENST00000554971 RPS3P23396 243 aaKnown RBP eCLIP16.86■□□□□ 0.29
SHOX-204ENST00000554971 HTR1BP28222 390 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 PEX19P40855 299 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms