RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 A0A1B0GX78 115 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 OR2A25A4D2G3 310 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 ARHGEF33A8MVX0 844 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 GFYI3L273 518 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 NDC80O14777 642 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 DSCR3O14972 297 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 KLHL41O60662 606 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 VPS26AO75436 327 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 CEACAM4O75871 244 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 CCNDBP1O95273 360 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 ALBP02768 609 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 CTSBP07858 339 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 IVDP26440 423 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 RPA3P35244 121 aaPredicted RBP8.36□□□□□ -1.07
ACTN1-213ENST00000554508 FOLR3P41439 243 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 RGS4P49798 205 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 CCL11P51671 97 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 PNLIPRP1P54315 467 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 ABATP80404 500 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 RELAQ04206 551 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 TLE1Q04724 770 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 CALCOCO2Q13137 446 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 FASTKQ14296 549 aaKnown RBP8.36□□□□□ -1.07
ACTN1-213ENST00000554508 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.36□□□□□ -1.07
ACTN1-213ENST00000554508 WASHC2DQ5SRD0 308 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 C1orf189Q5VU69 101 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 CYHR1Q6ZMK1 362 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 TTLL10Q6ZVT0 673 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 RNF44Q7L0R7 432 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 GALNT7Q86SF2 657 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 CNTN4Q8IWV2 1026 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 MMGT1Q8N4V1 131 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 C2CD4AQ8NCU7 369 aaPredicted RBP8.36□□□□□ -1.07
ACTN1-213ENST00000554508 OR2Y1Q8NGV0 311 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 GIMAP7Q8NHV1 300 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 CD200R1Q8TD46 325 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 FKBP10Q96AY3 582 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 LRRC39Q96DD0 335 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 FER1L6-AS2Q96M78 137 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 PKP4Q99569 1192 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 GPR21Q99679 349 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 SLC30A3Q99726 388 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 ERP44Q9BS26 406 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 LRRC1Q9BTT6 524 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 SLC25A23Q9BV35 468 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 TRIM55Q9BYV6 548 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 RAB17Q9H0T7 212 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 CLMPQ9H6B4 373 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 MLXIPLQ9NP71 852 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 MRPS30Q9NP92 439 aaKnown RBP8.36□□□□□ -1.07
ACTN1-213ENST00000554508 CUTCQ9NTM9 273 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 TAS2R13Q9NYV9 303 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 TRMT6Q9UJA5 497 aaKnown RBP8.36□□□□□ -1.07
ACTN1-213ENST00000554508 TSR3Q9UJK0 312 aaKnown RBP8.36□□□□□ -1.07
ACTN1-213ENST00000554508 SNX24Q9Y343 169 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 PTRH2Q9Y3E5 179 aaKnown RBP8.36□□□□□ -1.07
ACTN1-213ENST00000554508 MYO18BQ8IUG5 2567 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 CNTRLQ7Z7A1 2325 aa8.36□□□□□ -1.07
ACTN1-213ENST00000554508 RP1L1Q8IWN7 2480 aaPredicted RBP8.35□□□□□ -1.07
ACTN1-213ENST00000554508 A0A0J9YVX5 310 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 KRT87PA6NCN2 255 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 K7EM74 188 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 PEX12O00623 359 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 CTSVO60911 334 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 DNAJB5O75953 348 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 AHSGP02765 367 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 ERVK-10P10266 1014 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 PSMB5P28074 263 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 OTX2P32243 289 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 RPL21P46778 160 aaKnown RBP8.35□□□□□ -1.07
ACTN1-213ENST00000554508 CARSP49589 748 aaKnown RBP8.35□□□□□ -1.07
ACTN1-213ENST00000554508 PGDP52209 483 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 ITGA8P53708 1063 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 EMP3P54852 163 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 VSX2P58304 361 aaPredicted RBP8.35□□□□□ -1.07
ACTN1-213ENST00000554508 MPP1Q00013 466 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 SLC7A5Q01650 507 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 PRDX1Q06830 199 aaKnown RBP8.35□□□□□ -1.07
ACTN1-213ENST00000554508 CUL1Q13616 776 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 BBS9Q3SYG4 887 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 MSS51Q4VC12 460 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 ICE2Q659A1 982 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 CPZQ66K79 652 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 HIBCHQ6NVY1 386 aaPredicted RBP8.35□□□□□ -1.07
ACTN1-213ENST00000554508 FBXO42Q6P3S6 717 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 SUSD1Q6UWL2 747 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 UBE2R2Q712K3 238 aaPredicted RBP8.35□□□□□ -1.07
ACTN1-213ENST00000554508 OVCH1Q7RTY7 1134 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 PALM2Q8IXS6 379 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 NOA1Q8NC60 698 aaKnown RBP8.35□□□□□ -1.07
ACTN1-213ENST00000554508 BBOF1Q8ND07 529 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 MCOLN3Q8TDD5 553 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 ZNF480Q8WV37 535 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 CERS2Q96G23 380 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 ZFYVE21Q9BQ24 234 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 PLCD4Q9BRC7 762 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 DPH7Q9BTV6 452 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 ACAT2Q9BWD1 397 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 TRIM4Q9C037 500 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 EPN3Q9H201 632 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms