RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 TPPP3Q9BW30 176 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 OSBPL8Q9BZF1 889 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 OPN3Q9H1Y3 402 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PABPC3Q9H361 631 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ATXN3LQ9H3M9 355 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 RPF1Q9H9Y2 349 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SMURF1Q9HCE7 757 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 BRD7Q9NPI1 651 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 GKN1Q9NS71 199 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SACM1LQ9NTJ5 587 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 TMEM184CQ9NVA4 438 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PNPOQ9NVS9 261 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 EURLQ9NYK6 297 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 VSX1Q9NZR4 365 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PDP1Q9P0J1 537 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PTGFRNQ9P2B2 879 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CTSFQ9UBX1 484 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ENOPH1Q9UHY7 261 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 RPH3ALQ9UNE2 315 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PPP2R2CQ9Y2T4 447 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 GPSM3Q9Y4H4 160 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 DUSP10Q9Y6W6 482 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 A0A087WV48 116 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 TRAV19A0A0A6YYK7 116 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 A0A0U1RQV5 110 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 OR14I1A6ND48 311 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 OTOL1A6NHN0 477 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 TRPC5OSA6NMA1 111 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SLC38A8A6NNN8 435 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 KRTAP9-7A8MTY7 169 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 I3L4J1 428 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 KCNK3O14649 394 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 LRRTM2O43300 516 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 IDH3BO43837 385 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 DFNA5O60443 496 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 GPX5O75715 221 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CDK14O94921 469 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 MATN4O95460 622 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CHEK2O96017 543 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 OAS1P00973 400 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 EIF2S1P05198 315 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 C1QTNF9P0C862 333 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF888P0CJ79 500 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CCDC166P0CW27 439 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CXCL8P10145 99 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CPA3P15088 417 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 TNFRSF1AP19438 455 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CD40LGP29965 261 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PGM1P36871 562 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CAPGP40121 348 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CASP3P42574 277 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 LHX1P48742 406 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SLC9A3P48764 834 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SERPINB9P50453 376 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SELENOVP59797 346 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 RPS16P62249 146 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 VSNL1P62760 191 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 S100A12P80511 92 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 GLO1Q04760 184 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF33BQ06732 778 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 DYNC1I2Q13409 638 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 P3H1Q32P28 736 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 NADK2Q4G0N4 442 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 C4orf48Q5BLP8 95 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PIP5KL1Q5T9C9 394 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 RIPPLY2Q5TAB7 128 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 NAA35Q5VZE5 725 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 TTI2Q6NXR4 508 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SHISA2Q6UWI4 295 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 LAYNQ6UX15 382 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 LINC00696Q6ZRV3 163 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 USP53Q70EK8 1073 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CAMKMTQ7Z624 323 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PROSER1Q86XN7 944 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CCDC103Q8IW40 242 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CCDC117Q8IWD4 279 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ZC3H7AQ8IWR0 971 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CLEC4FQ8N1N0 589 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF786Q8N393 782 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PLD5Q8N7P1 536 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CADM4Q8NFZ8 388 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ADAMTS16Q8TE57 1224 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ZDHHC1Q8WTX9 485 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SLC44A1Q8WWI5 657 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 DNASE2BQ8WZ79 361 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CFHR4Q92496 578 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 TTC9Q92623 222 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 MRPS31Q92665 395 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 DVL3Q92997 716 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 TMA16Q96EY4 203 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 NEIL1Q96FI4 390 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 WBP1Q96G27 269 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF419Q96HQ0 510 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 QRFPRQ96P65 431 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 TRAPPC9Q96Q05 1148 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 GAL3ST4Q96RP7 486 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 TLR10Q9BXR5 811 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 POTEKPQ9BYX7 375 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 FBXO44Q9H4M3 255 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms