RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 GPR50Q13585 617 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 STARD3Q14849 445 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 TIGD6Q17RP2 521 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 TYSND1Q2T9J0 566 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 GOLGA7Q7Z5G4 137 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 TCAIMQ8N3R3 496 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 SPERTQ8NA61 448 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 LKAAEAR1Q8TD35 194 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 Q96MT0 163 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 CITED4Q96RK1 184 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 SIGLEC11Q96RL6 698 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 EGFL8Q99944 293 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 SGIP1Q9BQI5 828 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 IPPKQ9H8X2 491 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 SYTL2Q9HCH5 934 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 PRM3Q9NNZ6 103 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 AMBNQ9NP70 447 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 SLC25A37Q9NYZ2 338 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 FAM8A1Q9UBU6 413 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 TBC1D24Q9ULP9 559 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 ZFP37Q9Y6Q3 630 aaPredicted RBP16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 CAPN5O15484 640 aaPredicted RBP16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 NBNO60934 754 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 PRLP01236 227 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 FGF1P05230 155 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 PKMP14618 531 aaKnown RBP16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 SUOXP51687 545 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 GPLD1P80108 840 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 ARMC12Q5T9G4 340 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 ZNF517Q6ZMY9 492 aaPredicted RBP16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 GPR149Q86SP6 731 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 DEPDC4Q8N2C3 294 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 GRPEL2Q8TAA5 225 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 IPCEF1Q8WWN9 437 aaPredicted RBP16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 HEBP1Q9NRV9 189 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 TMEM45AQ9NWC5 275 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 OR7A17O14581 309 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 ANKRD28O15084 1053 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 MRPS14O60783 128 aaKnown RBP16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 WBP4O75554 376 aaKnown RBP16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 RPL9P32969 192 aaKnown RBP16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 TUFMP49411 452 aaKnown RBP16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 GATMP50440 423 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 CASP9P55211 416 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 IL2P60568 153 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 SMU1Q2TAY7 513 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 CCDC71Q8IV32 467 aaPredicted RBP16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 CDC26Q8NHZ8 85 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 ANGPTL6Q8NI99 470 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 SLC13A3Q8WWT9 602 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 PHOX2BQ99453 314 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 OR51E2Q9H255 320 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 MAGIXQ9H6Y5 334 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 NDRG4Q9ULP0 352 aaKnown RBP16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 ERVW-1Q9UQF0 538 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 PNMA8CA0A1B0GUJ8 204 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 KRT6AP02538 564 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 KRT6BP04259 564 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 ZNF140P52738 457 aaPredicted RBP16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 C19orf57Q0VDD7 668 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 MAP2K5Q13163 448 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 SF1Q15637 639 aaKnown RBP16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 FAM214AQ32MH5 1076 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 ATXN7L2Q5T6C5 722 aaPredicted RBP16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 KDM4DQ6B0I6 523 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 FAM151BQ6UXP7 276 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 DENND1CQ8IV53 801 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 OR8H2Q8N162 312 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 GTF3C2Q8WUA4 911 aaPredicted RBP16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 GTF2H4Q92759 462 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 GDF15Q99988 308 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 CINPQ9BW66 212 aaPredicted RBP16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 TM6SF2Q9BZW4 377 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 SATB2Q9UPW6 733 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 LOC110117498-PIK3R3F6TDL0 507 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 VPS26AO75436 327 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 ZNF682O95780 498 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 RPLP0P05388 317 aaKnown RBP16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 RETP07949 1114 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 HLA-DPA1P20036 260 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 HOXD9P28356 352 aaPredicted RBP16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 CREMQ03060 361 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 IL10RBQ08334 325 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 PCM1Q15154 2024 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 CPSF6Q16630 551 aaKnown RBP eCLIP16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 YIF1BQ5BJH7 314 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 TSPYL5Q86VY4 417 aaPredicted RBP16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 ZDHHC21Q8IVQ6 265 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 MSRB3Q8IXL7 192 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 LIX1Q8N485 282 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 TEX26Q8N6G2 289 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 KBTBD8Q8NFY9 601 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 DNASE1L2Q92874 299 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 CENPOQ9BU64 300 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 CCDC59Q9P031 241 aaKnown RBP16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 GRIP1Q9Y3R0 1128 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 LYVE1Q9Y5Y7 322 aa16.47■□□□□ 0.23
PPP4R3A-202ENST00000554390 FAM25AB3EWG3 89 aa16.46■□□□□ 0.23
PPP4R3A-202ENST00000554390 FAM25CB3EWG5 89 aa16.46■□□□□ 0.23
PPP4R3A-202ENST00000554390 FAM25GB3EWG6 89 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms