RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 PRKAB1Q9Y478 270 aa14.04□□□□□ -0.16
SHMT2-208ENST00000553868 POLQO75417 2590 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 ZFHX3Q15911 3703 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 SLCO1B7G3V0H7 640 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 TNFSF15O95150 251 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 RASGRP1O95267 797 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 MLYCDO95822 493 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 TNFP01375 233 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 THEGLP0DJG4 465 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 CKMT1AP12532 417 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 EEF1DP29692 281 aaKnown RBP14.03□□□□□ -0.16
SHMT2-208ENST00000553868 PIK3CGP48736 1102 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 BLKP51451 505 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 CLCNKAP51800 687 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 HK3P52790 923 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 SRP54P61011 504 aaKnown RBP14.03□□□□□ -0.16
SHMT2-208ENST00000553868 PCBP2Q15366 365 aaKnown RBP eCLIP14.03□□□□□ -0.16
SHMT2-208ENST00000553868 PHKG1Q16816 387 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 FRMD7Q6ZUT3 714 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 SPATA21Q7Z572 469 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 WDR75Q8IWA0 830 aaKnown RBP14.03□□□□□ -0.16
SHMT2-208ENST00000553868 OR13H1Q8NG92 308 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 CFAP61Q8NHU2 1237 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 MAPK15Q8TD08 544 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 UBTD2Q8WUN7 234 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 OR1E3Q8WZA6 343 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 CCDC138Q96M89 665 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 ELAC2Q9BQ52 826 aaKnown RBP14.03□□□□□ -0.16
SHMT2-208ENST00000553868 PLCD4Q9BRC7 762 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 OR52A5Q9H2C5 316 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 OSGEPL1Q9H4B0 414 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 KLC4Q9NSK0 619 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 TRNAU1APQ9NX07 287 aaKnown RBP14.03□□□□□ -0.16
SHMT2-208ENST00000553868 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-208ENST00000553868 GULP1Q9UBP9 304 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 SLC23A2Q9UGH3 650 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 PTBP2Q9UKA9 531 aaKnown RBP14.03□□□□□ -0.16
SHMT2-208ENST00000553868 RAP2CQ9Y3L5 183 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 ENTPD2Q9Y5L3 495 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 DGKBQ9Y6T7 804 aa14.03□□□□□ -0.16
SHMT2-208ENST00000553868 LY6G6EA0A0G2JKS1 128 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 NOBOXO60393 691 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 GUCA1CO95843 209 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 RPS17P08708 135 aaKnown RBP14.02□□□□□ -0.17
SHMT2-208ENST00000553868 GIMD1P0DJR0 217 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 SFTPCP11686 197 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 PDHA2P29803 388 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 HALP42357 657 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 DUSP3P51452 185 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-208ENST00000553868 UNC50Q53HI1 259 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 ARL13AQ5H913 290 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-208ENST00000553868 FAM83HQ6ZRV2 1179 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-208ENST00000553868 CACNA2D3Q8IZS8 1091 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 LILRA3Q8N6C8 439 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-208ENST00000553868 ANKS4BQ8N8V4 417 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 OR4C6Q8NH72 309 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 PIWIL2Q8TC59 973 aaKnown RBP14.02□□□□□ -0.17
SHMT2-208ENST00000553868 RHBDF1Q96CC6 855 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 FBXL8Q96CD0 374 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 FAR2Q96K12 515 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 RABEP2Q9H5N1 569 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 GPR27Q9NS67 375 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 KLHL14Q9P2G3 628 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 ANGPTL3Q9Y5C1 460 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 PCDHGA8Q9Y5G5 932 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 U3KQA8 63 aa14.02□□□□□ -0.17
SHMT2-208ENST00000553868 SPTY2D1-AS1A0A0U1RR47 76 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 ARHGEF33A8MVX0 844 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 ITM2AO43736 263 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 KDM1AO60341 852 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 SNX3O60493 162 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 LYPLA1O75608 230 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-208ENST00000553868 C1orf105O95561 183 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 ACADLP28330 430 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 INHBCP55103 352 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 ILF3Q12906 894 aaKnown RBP eCLIP14.01□□□□□ -0.17
SHMT2-208ENST00000553868 LCP2Q13094 533 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 ALG11Q2TAA5 492 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 RD3Q7Z3Z2 195 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 PIGWQ7Z7B1 504 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 PARGQ86W56 976 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 HID1Q8IV36 788 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 DCUN1D3Q8IWE4 304 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 RAB42Q8N4Z0 105 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 CCDC197Q8NCU1 140 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 ZNF483Q8TF39 744 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-208ENST00000553868 TFGQ92734 400 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-208ENST00000553868 DLG3Q92796 817 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 RAD51AP1Q96B01 352 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 PDXPQ96GD0 296 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 APOLD1Q96LR9 279 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 CD244Q9BZW8 370 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 WWP1Q9H0M0 922 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 GSTO2Q9H4Y5 243 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 MRPL40Q9NQ50 206 aaKnown RBP14.01□□□□□ -0.17
SHMT2-208ENST00000553868 GEMIN8Q9NWZ8 242 aaKnown RBP14.01□□□□□ -0.17
SHMT2-208ENST00000553868 OPTCQ9UBM4 332 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 VTI1BQ9UEU0 232 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 HAO1Q9UJM8 370 aa14.01□□□□□ -0.17
SHMT2-208ENST00000553868 KCNK6Q9Y257 313 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms