RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SPRTNQ9H040 489 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-219ENST00000553488 DEF6Q9H4E7 631 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 XKR8Q9H6D3 395 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 COG4Q9H9E3 785 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 OLAHQ9NV23 265 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 ANO10Q9NW15 660 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 HACD3Q9P035 362 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 IFT80Q9P2H3 777 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-219ENST00000553488 NDOR1Q9UHB4 597 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 FAM153AQ9UHL3 310 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 ICKQ9UPZ9 632 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 RNF114Q9Y508 228 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 HEBP2Q9Y5Z4 205 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 HS3ST3B1Q9Y662 390 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 COLEC10Q9Y6Z7 277 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 FLNAP21333 2647 aaKnown RBP6.99□□□□□ -1.29
ATXN3-219ENST00000553488 HRNRQ86YZ3 2850 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-219ENST00000553488 PRRC2AP48634 2157 aaKnown RBP6.98□□□□□ -1.29
ATXN3-219ENST00000553488 LRRD1A4D1F6 860 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 APOL1O14791 398 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 PPP1R12AO14974 1030 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-219ENST00000553488 JRKO75564 520 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 CBX7O95931 251 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 ONECUT2O95948 504 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 EPOP01588 193 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 POLBP06746 335 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 CD63P08962 238 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 UGT2B7P16662 529 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 PEBP1P30086 187 aaKnown RBP6.98□□□□□ -1.29
ATXN3-219ENST00000553488 KRTAP10-9P60411 292 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 XIAPP98170 497 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 FANCCQ00597 558 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 IKZF1Q13422 519 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 ZNF630Q2M218 657 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-219ENST00000553488 FIGNQ5HY92 759 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 AGAP7PQ5VUJ5 663 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 CCDC70Q6NSX1 233 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 SARM1Q6SZW1 724 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 KIRREL2Q6UWL6 708 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 AMIGO1Q86WK6 493 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 CFAP206Q8IYR0 622 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 ZNF808Q8N4W9 903 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-219ENST00000553488 SLC25A41Q8N5S1 370 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 ZNF655Q8N720 491 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-219ENST00000553488 BCORP1Q8N888 145 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 ZNF398Q8TD17 642 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 NR4A3Q92570 626 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 RBM41Q96IZ5 413 aaKnown RBP6.98□□□□□ -1.29
ATXN3-219ENST00000553488 AGAP4Q96P64 663 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 GORASP1Q9BQQ3 440 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 MESP1Q9BRJ9 268 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 CCM2Q9BSQ5 444 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 HGH1Q9BTY7 390 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 LHPPQ9H008 270 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 SLC26A1Q9H2B4 701 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 EPS8L2Q9H6S3 715 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 MVB12BQ9H7P6 319 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 WDR54Q9H977 334 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 PRDM7Q9NQW5 492 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 LMBRD1Q9NUN5 540 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 C19orf73Q9NVV2 129 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 SPHK1Q9NYA1 384 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 ARL5AQ9Y689 179 aa6.98□□□□□ -1.29
ATXN3-219ENST00000553488 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-219ENST00000553488 NSD1Q96L73 2696 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-219ENST00000553488 IGLV3-16A0A075B6K0 115 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 A0A0J9YY10 115 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 C17orf113A0A1B0GUU1 675 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 SLC22A31A6NKX4 558 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 H3BS24 57 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 SRP72O76094 671 aaKnown RBP6.97□□□□□ -1.29
ATXN3-219ENST00000553488 KLHL18O94889 574 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 ESR1P03372 595 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 SNRPB2P08579 225 aaKnown RBP6.97□□□□□ -1.29
ATXN3-219ENST00000553488 TPBGLP0DKB5 382 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 COX6B1P14854 86 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 PECAM1P16284 738 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-219ENST00000553488 HTR1EP28566 365 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 PDHA2P29803 388 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 CD151P48509 253 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 HCFC1P51610 2035 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 MFAP5Q13361 173 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 MSLNQ13421 630 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-219ENST00000553488 INAQ16352 499 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 TUBB8Q3ZCM7 444 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 ALKBH5Q6P6C2 394 aaKnown RBP6.97□□□□□ -1.29
ATXN3-219ENST00000553488 TLDC1Q6P9B6 456 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 MICALCLQ6ZW33 695 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 MRGPRGQ86SM5 289 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 DNAJC22Q8N4W6 341 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 CATSPER1Q8NEC5 780 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 OR11G2Q8NGC1 345 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 RNF141Q8WVD5 230 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 SYN2Q92777 582 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-219ENST00000553488 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.97□□□□□ -1.29
ATXN3-219ENST00000553488 NAP1L5Q96NT1 182 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-219ENST00000553488 FCRL5Q96RD9 977 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 FERD3LQ96RJ6 166 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 PACSIN1Q9BY11 444 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 CHST11Q9NPF2 352 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms