RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 EMP2P54851 167 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 COPS2P61201 443 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 YBX1P67809 324 aaKnown RBP8.64□□□□□ -1.03
SYNE2-209ENST00000553308 RBPJQ06330 500 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 SEMA3AQ14563 771 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 PCOLCEQ15113 449 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 MUM1Q2TAK8 710 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.64□□□□□ -1.03
SYNE2-209ENST00000553308 CCSMST1Q4G0I0 132 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 C11orf63Q6NUN7 778 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 AADACL2Q6P093 401 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 UNC5DQ6UXZ4 953 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 NCCRP1Q6ZVX7 275 aaPredicted RBP8.64□□□□□ -1.03
SYNE2-209ENST00000553308 RNF44Q7L0R7 432 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 KRT222Q8N1A0 295 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 TAB3Q8N5C8 712 aaPredicted RBP8.64□□□□□ -1.03
SYNE2-209ENST00000553308 OR2L3Q8NG85 312 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 OR13J1Q8NGT2 312 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 DNAJB8Q8NHS0 232 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 ZUFSPQ96AP4 578 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 ALS2CR12Q96Q35 445 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 OSBPL8Q9BZF1 889 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 RNF32Q9H0A6 362 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 SYNPO2LQ9H987 977 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 LRRC40Q9H9A6 602 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 RIC8BQ9NVN3 520 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 TRPC4Q9UBN4 977 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 SLC2A6Q9UGQ3 507 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 SLC39A10Q9ULF5 831 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 RUVBL2Q9Y230 463 aaKnown RBP8.64□□□□□ -1.03
SYNE2-209ENST00000553308 MED13LQ71F56 2210 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 HIVEP1P15822 2718 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 OR5H15A6NDH6 313 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 FKBP9O95302 570 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 APOA4P06727 396 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 ERVK-10P10266 1014 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 ESRRAP11474 423 aaPredicted RBP8.63□□□□□ -1.03
SYNE2-209ENST00000553308 CTNNA1P35221 906 aaKnown RBP8.63□□□□□ -1.03
SYNE2-209ENST00000553308 PTPN7P35236 360 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 EFNA3P52797 238 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 GDF10P55107 478 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 CASP6P55212 293 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 ZNF33BQ06732 778 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 DSG2Q14126 1118 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 PARP6Q2NL67 630 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 PRTGQ2VWP7 1150 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 ABHD17BQ5VST6 288 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 AFTPHQ6ULP2 937 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 SPNS3Q6ZMD2 512 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 RIPOR1Q6ZS17 1223 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 NEK10Q6ZWH5 1172 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 ZNF534Q76KX8 674 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 CDH24Q86UP0 819 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 AMER3Q8N944 861 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 FAM71DQ8N9W8 422 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 OR52K1Q8NGK4 314 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 SUN3Q8TAQ9 357 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 ADAMTS18Q8TE60 1221 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 ASZ1Q8WWH4 475 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 HDAC10Q969S8 669 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 MTFMTQ96DP5 389 aaKnown RBP8.63□□□□□ -1.03
SYNE2-209ENST00000553308 MAGED4Q96JG8 741 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 CABS1Q96KC9 395 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 YIPF2Q9BWQ6 316 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 RAB11FIP5Q9BXF6 653 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 TSPAN10Q9H1Z9 355 aaPredicted RBP8.63□□□□□ -1.03
SYNE2-209ENST00000553308 C14orf105Q9NVL8 296 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 EFR3BQ9Y2G0 817 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 R3HDM2Q9Y2K5 976 aaKnown RBP8.63□□□□□ -1.03
SYNE2-209ENST00000553308 KLK4Q9Y5K2 254 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 NFS1Q9Y697 457 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 CELSR1Q9NYQ6 3014 aa8.63□□□□□ -1.03
SYNE2-209ENST00000553308 LOC102723996A0A087X1L8 192 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 A0A0U1RQJ8 604 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 A0A1W2PPV9 198 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 OR2A25A4D2G3 310 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 FAM227AF5H4B4 570 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 F8W8V4 182 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 H0YGG7 62 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 DIAPH2O60879 1101 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 SLCO2B1O94956 709 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 CLDN14O95500 239 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 C1orf105O95561 183 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 HEXBP07686 556 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 TPM1P09493 284 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 AGAP20933 346 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 AOAHP28039 575 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 ANP32AP39687 249 aaKnown RBP8.62□□□□□ -1.03
SYNE2-209ENST00000553308 MAGEA1P43355 309 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 ST13P50502 369 aaKnown RBP8.62□□□□□ -1.03
SYNE2-209ENST00000553308 SMSP52788 366 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 ARF3P61204 181 aaPredicted RBP8.62□□□□□ -1.03
SYNE2-209ENST00000553308 FASTKQ14296 549 aaKnown RBP8.62□□□□□ -1.03
SYNE2-209ENST00000553308 TMED2Q15363 201 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 SYT16Q17RD7 645 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 KRTAP21-3Q3LHN1 58 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 ZNF766Q5HY98 468 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 LDB1Q86U70 411 aaPredicted RBP8.62□□□□□ -1.03
SYNE2-209ENST00000553308 VSTM4Q8IW00 320 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 CEP97Q8IW35 865 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms