RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 GAS8O95995 478 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 PGK2P07205 417 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 SP9P0CG40 484 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 KRT5P13647 590 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 JAK1P23458 1154 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 DNAJB1P25685 340 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 MNDAP41218 407 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 TMPOP42166 694 aaKnown RBP5.44□□□□□ -1.54
SCFD1-208ENST00000553278 OR3A1P47881 315 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 RFX5P48382 616 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-208ENST00000553278 IFNAR2P48551 515 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 PDX1P52945 283 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 CX3CL1P78423 397 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 CACNG1Q06432 222 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 CETN1Q12798 172 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 SCGB2A2Q13296 93 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 UGT3A2Q3SY77 523 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 EFHC1Q5JVL4 640 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 NDUFAF5Q5TEU4 345 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 AGAP6Q5VW22 663 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 AFTPHQ6ULP2 937 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 MARK2Q7KZI7 788 aaKnown RBP5.44□□□□□ -1.54
SCFD1-208ENST00000553278 YTHDF3Q7Z739 585 aaKnown RBP5.44□□□□□ -1.54
SCFD1-208ENST00000553278 MRGPRGQ86SM5 289 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 CROCCP3Q8IVE0 287 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 ARFGAP1Q8N6T3 406 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 CCDC63Q8NA47 563 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 NOA1Q8NC60 698 aaKnown RBP5.44□□□□□ -1.54
SCFD1-208ENST00000553278 SLCO4A1Q96BD0 722 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 TSSK2Q96PF2 358 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 SLC25A33Q9BSK2 321 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 C1QTNF7Q9BXJ2 289 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 ACPTQ9BZG2 426 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 MIS12Q9H081 205 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 NT5C3AQ9H0P0 336 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 R3HDMLQ9H3Y0 253 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 RPF1Q9H9Y2 349 aaKnown RBP5.44□□□□□ -1.54
SCFD1-208ENST00000553278 KCNMB3Q9NPA1 279 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 SOHLH2Q9NX45 425 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 NOCTQ9UK39 431 aaKnown RBP5.44□□□□□ -1.54
SCFD1-208ENST00000553278 NUDCQ9Y266 331 aa5.44□□□□□ -1.54
SCFD1-208ENST00000553278 KIAA1217Q5T5P2 1943 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 MACROD2A1Z1Q3 448 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 MAGEB16A2A368 324 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 LILRA5A6NI73 299 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 GAPDHSO14556 408 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-208ENST00000553278 MCF2LO15068 1137 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 RGS14O43566 566 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 KRT19P08727 400 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 MMP10P09238 476 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 TSPY4P0CV99 314 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 TSPY10P0CW01 314 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 IGHV4-30-4P0DP06 118 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 HSPA8P11142 646 aaKnown RBP5.43□□□□□ -1.54
SCFD1-208ENST00000553278 NCF1P14598 390 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-208ENST00000553278 ELAVL4P26378 380 aaKnown RBP5.43□□□□□ -1.54
SCFD1-208ENST00000553278 SSTR2P30874 369 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 GNL1P36915 607 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-208ENST00000553278 MDH1P40925 334 aaKnown RBP5.43□□□□□ -1.54
SCFD1-208ENST00000553278 CNN1P51911 297 aaKnown RBP5.43□□□□□ -1.54
SCFD1-208ENST00000553278 HUNKP57058 714 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 RPS18P62269 152 aaKnown RBP5.43□□□□□ -1.54
SCFD1-208ENST00000553278 KLC1Q07866 573 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 ZNF234Q14588 700 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 EPC2Q52LR7 807 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 CYP4A22Q5TCH4 519 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 CES4AQ5XG92 561 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 LYSMD4Q5XG99 296 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 PM20D1Q6GTS8 502 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 TRNP1Q6NT89 227 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 IRGCQ6NXR0 463 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 DLEU7Q6UYE1 221 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 TMEM110Q86TL2 294 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 TMPRSS12Q86WS5 348 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 LEMD2Q8NC56 503 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 FAM98AQ8NCA5 519 aaKnown RBP5.43□□□□□ -1.54
SCFD1-208ENST00000553278 OR13J1Q8NGT2 312 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 DPF1Q92782 380 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 CHFRQ96EP1 664 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 CDCA5Q96FF9 252 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 OXNAD1Q96HP4 312 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-208ENST00000553278 C3orf30Q96M34 536 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 OR1F2PQ96R84 312 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 TXN2Q99757 166 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 CRACR2AQ9BSW2 395 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 THUMPD2Q9BTF0 503 aaKnown RBP5.43□□□□□ -1.54
SCFD1-208ENST00000553278 ATG10Q9H0Y0 220 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 UBQLN3Q9H347 655 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 SPHK1Q9NYA1 384 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 EXTL2Q9UBQ6 330 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 KLK4Q9Y5K2 254 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 PFASO15067 1338 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 UBE4BO95155 1302 aa5.43□□□□□ -1.54
SCFD1-208ENST00000553278 COL11A2P13942 1736 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-208ENST00000553278 IGLV5-39A0A0G2JS06 123 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 A0A0U1RQJ8 604 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 A0A1W2PRB8 838 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 TMEM129A0AVI4 362 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 NPIPA3F8WFD2 350 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 O00370 1275 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms