RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 RAB10P61026 200 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 TBPL1P62380 186 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 ABATP80404 500 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 PRAMEF17Q5VTA0 474 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 PRAMEF13Q5VWM6 474 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 FCRL6Q6DN72 434 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 TLDC1Q6P9B6 456 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 AGTRAPQ6RW13 159 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 TMEM207Q6UWW9 146 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 MBOAT1Q6ZNC8 495 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 RAPH1Q70E73 1250 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 ADCK2Q7Z695 626 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 MCATQ8IVS2 390 aaKnown RBP17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 ANKRD7Q92527 254 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 SELENOSQ9BQE4 189 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 ACSS3Q9H6R3 686 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 CROTQ9UKG9 612 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 NOVA2Q9UNW9 492 aaKnown RBP17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 SRPK3Q9UPE1 567 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 PCDHGA4Q9Y5G9 962 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 IKBKGQ9Y6K9 419 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 ZNF891A8MT65 544 aaPredicted RBP17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 ZNF749O43361 778 aa17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 FAM155BO75949 473 aa17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 GUCA1CO95843 209 aa17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 CCND1P24385 295 aa17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 GABRA4P48169 554 aa17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 PRDX1Q06830 199 aaKnown RBP17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 GPS2Q13227 327 aa17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 NAE1Q13564 534 aa17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 TAOK1Q7L7X3 1001 aa17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 ZNF655Q8N720 491 aaPredicted RBP17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 LRFN5Q96NI6 719 aa17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 EGFL8Q99944 293 aa17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 NDC1Q9BTX1 674 aa17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 DERL2Q9GZP9 239 aa17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 ATG10Q9H0Y0 220 aa17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 SLC6A20Q9NP91 592 aa17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 TXLNGQ9NUQ3 528 aa17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 KCND3Q9UK17 655 aa17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 KLK4Q9Y5K2 254 aa17.74■□□□□ 0.43
PRPF40B-216ENST00000552301 A0A0J9YVX5 310 aa17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 MEN1O00255 615 aa17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 CDC7O00311 574 aa17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 ZNF500O60304 480 aaPredicted RBP17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 INHBAP08476 426 aa17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 TCN2P20062 427 aa17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 MC1RQ01726 317 aa17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 DNASE1L3Q13609 305 aa17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 TCTE1Q5JU00 501 aa17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 CAPN13Q6MZZ7 669 aaPredicted RBP17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 SBSNQ6UWP8 590 aa17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 TTC29Q8NA56 475 aaPredicted RBP17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 LRRN4CLQ8ND94 238 aa17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 CT55Q8WUE5 264 aa17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 ANKRD49Q8WVL7 239 aa17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 FBXL8Q96CD0 374 aa17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 SLC45A3Q96JT2 553 aa17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 ZFYVE21Q9BQ24 234 aa17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 SPRTNQ9H040 489 aaPredicted RBP17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 SNX7Q9UNH6 387 aa17.73■□□□□ 0.43
PRPF40B-216ENST00000552301 CELSR3Q9NYQ7 3312 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 SEC16AO15027 2179 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 A0A087WUV0 522 aaPredicted RBP17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 OR2A25A4D2G3 310 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 C21orf140B9A014 251 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 C9J4A7 227 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 HCRTR1O43613 425 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 CTSVO60911 334 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 KATNA1O75449 491 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 ANXA5P08758 320 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 CCDC166P0CW27 439 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 AGXTP21549 392 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 CRABP2P29373 138 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 ATP6V0D1P61421 351 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 GRM7Q14831 915 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 TSNQ15631 228 aaKnown RBP17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 ZKSCAN8Q15776 578 aaPredicted RBP17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 RNF44Q7L0R7 432 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 TBC1D1Q86TI0 1168 aaPredicted RBP17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 C17orf64Q86WR6 236 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 LRRC56Q8IYG6 542 aaPredicted RBP17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 DSELQ8IZU8 1212 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 SNRNP27Q8WVK2 155 aaKnown RBP17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 STARD8Q92502 1023 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 PLCD4Q9BRC7 762 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 HAUS8Q9BT25 410 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 UNKQ9C0B0 810 aaKnown RBP17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 PCMTD2Q9NV79 361 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 IL17BQ9UHF5 180 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 IKZF3Q9UKT9 509 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 FAM208BQ5VWN6 2430 aa17.72■□□□□ 0.43
PRPF40B-216ENST00000552301 LAMA5O15230 3695 aa17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 ESPNB1AK53 854 aa17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 SRPX2O60687 465 aaPredicted RBP17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 EZRP15311 586 aaKnown RBP17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 WT1P19544 449 aaPredicted RBP17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 HRH2P25021 359 aa17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 ARSFP54793 590 aa17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 VSX2P58304 361 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms