RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, human

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-208	ENST00000551338	SGK2	Q9HBY8	427 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	ITM2C	Q9NQX7	267 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	SLC23A2	Q9UGH3	650 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	PCDHB3	Q9Y5E6	796 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	FANCM	Q8IYD8	2048 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	SNRNP200	O75643	2136 aa	Known RBP	11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338		A0A096LPI6	279 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	MAGEA13P	A6NCF6	341 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	ANHX	E9PGG2	379 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	GPI	P06744	558 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	PCSK2	P16519	638 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	ZNF26	P17031	533 aa	Predicted RBP	11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	COL9A1	P20849	921 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	OXTR	P30559	389 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	S100A3	P33764	101 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	LTBR	P36941	435 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	RAE1	P78406	368 aa	Known RBP	11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	MRPS35	P82673	323 aa	Known RBP	11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	TAP2	Q03519	686 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	RPA4	Q13156	261 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	DDX39B	Q13838	428 aa	Known RBP	11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	INPP5A	Q14642	412 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	MAPKAPK3	Q16644	382 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	MTX3	Q5HYI7	312 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	TBCEL	Q5QJ74	424 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	NOXRED1	Q6NXP6	359 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	AMIGO2	Q86SJ2	522 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	SYTL1	Q8IYJ3	562 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	ICA1L	Q8NDH6	482 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	OR7G3	Q8NG95	312 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	CSGALNACT1	Q8TDX6	532 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	NEIL2	Q969S2	332 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	C11orf24	Q96F05	449 aa	Predicted RBP	11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	MSLNL	Q96KJ4	702 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	EGLN2	Q96KS0	407 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	IL17F	Q96PD4	163 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	OR52E6	Q96RD3	313 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	MTERF1	Q99551	399 aa	Known RBP	11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	GABRG3	Q99928	467 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	CPPED1	Q9BRF8	314 aa	Predicted RBP	11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	EFHD1	Q9BUP0	239 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	SPNS1	Q9H2V7	528 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	IKZF5	Q9H5V7	419 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	RPF2	Q9H7B2	306 aa	Known RBP	11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	BRF2	Q9HAW0	419 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	SERHL	Q9NQF3	203 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	SLC6A13	Q9NSD5	602 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	CLDND1	Q9NY35	253 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	MAGEL2	Q9UJ55	1249 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	CNOT11	Q9UKZ1	510 aa	Known RBP	11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	DYRK1B	Q9Y463	629 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	KCNE2	Q9Y6J6	123 aa		11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	NUP214	P35658	2090 aa	Predicted RBP	11.13	□□□□□ -0.63
RAB5C-208	ENST00000551338	MAGEB17	A8MXT2	336 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	PLRG1	O43660	514 aa	Known RBP	11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	PRMT3	O60678	531 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	LRAT	O95237	230 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	B3GALT4	O96024	378 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	EGF	P01133	1207 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	UBTFL6	P0CB48	400 aa	Predicted RBP	11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	C1GALT1C1L	P0DN25	315 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	ERG	P11308	486 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	PCNA	P12004	261 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	NPPB	P16860	134 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	GGT1	P19440	569 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	PTPN6	P29350	595 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	NTSR1	P30989	418 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	CTH	P32929	405 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	SOX11	P35716	441 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	IGFALS	P35858	605 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	HNRNPF	P52597	415 aa	Known RBP	11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	C21orf58	P58505	322 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	RPS13	P62277	151 aa	Known RBP	11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	MTAP	Q13126	283 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	SLBP	Q14493	270 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	UGT8	Q16880	541 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	CATSPERE	Q5SY80	951 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	GLYAT	Q6IB77	296 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	OR4F3	Q6IEY1	312 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	MED27	Q6P2C8	311 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	LCTL	Q6UWM7	567 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	MSANTD1	Q6ZTZ1	278 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	AMZ2	Q86W34	360 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	PROSER1	Q86XN7	944 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	DCUN1D3	Q8IWE4	304 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	LAS2	Q8IYD9	372 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	DTWD1	Q8N5C7	304 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	ANKFN1	Q8N957	763 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	PAPD5	Q8NDF8	572 aa	Known RBP	11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	ZNF548	Q8NEK5	533 aa	Predicted RBP	11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	OR5AR1	Q8NGP9	310 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	HUS1B	Q8NHY5	278 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	NELL1	Q92832	810 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	KLK6	Q92876	244 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	METTL2A	Q96IZ6	378 aa	Known RBP	11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	ZNF583	Q96ND8	569 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	INPP5K	Q9BT40	448 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	C1QTNF2	Q9BXJ5	285 aa		11.12	□□□□□ -0.63

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