RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 TRIM64CA6NLI5 447 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 OR2AG2A6NM03 316 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 ARHGEF33A8MVX0 844 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 C1QTNF3-AMACRE9PGA6 284 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 PDLIM1O00151 329 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 FPGTO14772 594 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 TSPAN6O43657 245 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 E2F6O75461 281 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 CREG1O75629 220 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 RFPL2O75678 378 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 RPN2P04844 631 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 CISD3P0C7P0 127 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 COX7A2P14406 83 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 ITPKAP23677 461 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 HSD17B2P37059 387 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 ALDH3B2P48448 385 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 CDK9P50750 372 aaKnown RBP8.68□□□□□ -1.02
TMEM116-209ENST00000550020 PFN3P60673 137 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 SEMG2Q02383 582 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 ELAVL3Q14576 367 aaKnown RBP8.68□□□□□ -1.02
TMEM116-209ENST00000550020 ZBED5Q49AG3 693 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 FNDC3BQ53EP0 1204 aaKnown RBP8.68□□□□□ -1.02
TMEM116-209ENST00000550020 RBM48Q5RL73 367 aaKnown RBP8.68□□□□□ -1.02
TMEM116-209ENST00000550020 MED27Q6P2C8 311 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 TMEM220Q6QAJ8 160 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 SUSD1Q6UWL2 747 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 UNC5DQ6UXZ4 953 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 MBOAT1Q6ZNC8 495 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 LPCAT2Q7L5N7 544 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 R3HCC1LQ7Z5L2 792 aaKnown RBP8.68□□□□□ -1.02
TMEM116-209ENST00000550020 GRASPQ7Z6J2 395 aaPredicted RBP8.68□□□□□ -1.02
TMEM116-209ENST00000550020 CALHM3Q86XJ0 350 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 EPHX4Q8IUS5 362 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 C8orf59Q8N0T1 100 aaPredicted RBP8.68□□□□□ -1.02
TMEM116-209ENST00000550020 KRTCAP2Q8N6L1 136 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 NAT16Q8N8M0 369 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 RASGEF1AQ8N9B8 481 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 OR8J2Q8NGG1 315 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 OR56A3Q8NH54 315 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 OR5K1Q8NHB7 308 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 CYB5D2Q8WUJ1 264 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 HERVK_113Q902F9 699 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 SCAMP4Q969E2 229 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 TMBIM1Q969X1 311 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 TBC1D20Q96BZ9 403 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 NUS1Q96E22 293 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 PYURFQ96I23 114 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 MAGED4Q96JG8 741 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 CNDP2Q96KP4 475 aaKnown RBP8.68□□□□□ -1.02
TMEM116-209ENST00000550020 APOLD1Q96LR9 279 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 COQ10AQ96MF6 247 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 TSSK3Q96PN8 268 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 PANX1Q96RD7 426 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 ING2Q9H160 280 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 RAD21L1Q9H4I0 556 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 PIF1Q9H611 641 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 SGK2Q9HBY8 427 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 HPS4Q9NQG7 708 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 SPATA6Q9NWH7 488 aaPredicted RBP8.68□□□□□ -1.02
TMEM116-209ENST00000550020 STOX2Q9P2F5 926 aaPredicted RBP8.68□□□□□ -1.02
TMEM116-209ENST00000550020 BTNL2Q9UIR0 455 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 GPR34Q9UPC5 381 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 GMEB1Q9Y692 573 aa8.68□□□□□ -1.02
TMEM116-209ENST00000550020 MGAT4DA6NG13 374 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 TRIM64A6NGJ6 449 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 FADS2P1A8MWK0 482 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 MAGEB17A8MXT2 336 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 FOXE1O00358 373 aaPredicted RBP8.67□□□□□ -1.02
TMEM116-209ENST00000550020 VILLO15195 856 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 LZTS3O60299 673 aaPredicted RBP8.67□□□□□ -1.02
TMEM116-209ENST00000550020 DNAJB5O75953 348 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 CYP17A1P05093 508 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 EPCAMP16422 314 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 SERPINB1P30740 379 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 GPR1P46091 355 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 NEK2P51955 445 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 NUP107P57740 925 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 ADARB1P78563 741 aaKnown RBP8.67□□□□□ -1.02
TMEM116-209ENST00000550020 DPTQ07507 201 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 VAC14Q08AM6 782 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 RPA4Q13156 261 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 NAE1Q13564 534 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 VEZF1Q14119 521 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 DOC2AQ14183 400 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 SELPLGQ14242 412 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 TEAD4Q15561 434 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 HNRNPA1L2Q32P51 320 aaKnown RBP8.67□□□□□ -1.02
TMEM116-209ENST00000550020 TMEM52BQ4KMG9 183 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 CYBRD1Q53TN4 286 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 ZC3H12BQ5HYM0 836 aaKnown RBP8.67□□□□□ -1.02
TMEM116-209ENST00000550020 FAM46CQ5VWP2 391 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 TMEM215Q68D42 235 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 NAIF1Q69YI7 327 aaPredicted RBP8.67□□□□□ -1.02
TMEM116-209ENST00000550020 RFLNAQ6ZTI6 216 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 USP51Q70EK9 711 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 CAMKMTQ7Z624 323 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 STK32CQ86UX6 486 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 ERI1Q8IV48 349 aaKnown RBP8.67□□□□□ -1.02
TMEM116-209ENST00000550020 VRK3Q8IV63 474 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 RAB42Q8N4Z0 105 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms