RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 WFS1O76024 890 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 OR4F21O95013 312 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 KRT6AP02538 564 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 KRT6BP04259 564 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 ZNF806P0C7X5 589 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 KITP10721 976 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 JUPP14923 745 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 GLB1P16278 677 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 CXCR2P25025 360 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 CMPK1P30085 196 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 HMOX2P30519 316 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 GPR3P46089 330 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 KRT6CP48668 564 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 PRDX1Q06830 199 aaKnown RBP16.79■□□□□ 0.28
LETMD1-220ENST00000549686 XKR6Q5GH73 641 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 ICE2Q659A1 982 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 GRHL2Q6ISB3 625 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 CGB2Q6NT52 195 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 LETMD1Q6P1Q0 360 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 NXPE4Q6UWF7 544 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 SLCO4C1Q6ZQN7 724 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 ZNF438Q7Z4V0 828 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 ADGRF3Q8IZF5 1079 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 SUMF1Q8NBK3 374 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 METTL6Q8TCB7 284 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 ZNF473Q8WTR7 871 aaKnown RBP16.79■□□□□ 0.28
LETMD1-220ENST00000549686 NEIL2Q969S2 332 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 UBE2E3Q969T4 207 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 REPS1Q96D71 796 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 ELAC2Q9BQ52 826 aaKnown RBP16.79■□□□□ 0.28
LETMD1-220ENST00000549686 PLCD4Q9BRC7 762 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 GTPBP2Q9BX10 602 aaKnown RBP16.79■□□□□ 0.28
LETMD1-220ENST00000549686 FSCN3Q9NQT6 498 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 ZNF225Q9UK10 706 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 SNX6Q9UNH7 406 aa16.79■□□□□ 0.28
LETMD1-220ENST00000549686 APOBEC2Q9Y235 224 aaKnown RBP16.79■□□□□ 0.28
LETMD1-220ENST00000549686 C2orf74A8MZ97 194 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 E7EQ34 232 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 PPM1DO15297 605 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 LRP3O75074 770 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 C1GALT1C1LP0DN25 315 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 PNLIPP16233 465 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 PRDX3P30048 256 aaKnown RBP16.78■□□□□ 0.28
LETMD1-220ENST00000549686 CCR8P51685 355 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 INHBCP55103 352 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 NR1D2Q14995 579 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 NR0B2Q15466 257 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 HIST2H2ACQ16777 129 aaPredicted RBP16.78■□□□□ 0.28
LETMD1-220ENST00000549686 HIST2H2AA3Q6FI13 130 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 ARMC6Q6NXE6 501 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 TMPRSS11BQ86T26 416 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 SFTPA2Q8IWL1 248 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 SLC35F3Q8IY50 421 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 MINDY1Q8N5J2 469 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 C2orf73Q8N5S3 287 aaPredicted RBP16.78■□□□□ 0.28
LETMD1-220ENST00000549686 CDYL2Q8N8U2 506 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 LMNTD1Q8N9Z9 388 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 ABHD11Q8NFV4 315 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 OR2A1Q8NGT9 310 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 AGR3Q8TD06 166 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 CCT6BQ92526 530 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 IL21RQ9HBE5 538 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 ABCF3Q9NUQ8 709 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 DNAAF2Q9NVR5 837 aaKnown RBP16.78■□□□□ 0.28
LETMD1-220ENST00000549686 PCDHGA11Q9Y5H2 935 aa16.78■□□□□ 0.28
LETMD1-220ENST00000549686 OR6C74A6NCV1 312 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 OR5K3A6NET4 321 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 ISM1B1AKI9 464 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 H0YIV9 168 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 BTN3A3O00478 584 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 FOXD2O60548 495 aaPredicted RBP16.77■□□□□ 0.28
LETMD1-220ENST00000549686 UBXN7O94888 489 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 CAPN1P07384 714 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 ARFIP2P53365 341 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 AQP5P55064 265 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 DOC2AQ14183 400 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 TERF2Q15554 542 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 SF1Q15637 639 aaKnown RBP16.77■□□□□ 0.28
LETMD1-220ENST00000549686 SLC5A12Q1EHB4 618 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 UGT3A2Q3SY77 523 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 GATAD2AQ86YP4 633 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 MYLK4Q86YV6 388 aaPredicted RBP16.77■□□□□ 0.28
LETMD1-220ENST00000549686 KRT78Q8N1N4 520 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 ANKS4BQ8N8V4 417 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 TWIST2Q8WVJ9 160 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 ATOH1Q92858 354 aaPredicted RBP16.77■□□□□ 0.28
LETMD1-220ENST00000549686 CDK15Q96Q40 435 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 AIF1LQ9BQI0 150 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 TNFRSF12AQ9NP84 129 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 MRPS30Q9NP92 439 aaKnown RBP16.77■□□□□ 0.28
LETMD1-220ENST00000549686 HRASLS2Q9NWW9 162 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 ACTR10Q9NZ32 417 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 ANKMY1Q9P2S6 941 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 LRIT1Q9P2V4 623 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 PADI4Q9UM07 663 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 RNF11Q9Y3C5 154 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 TSC22D4Q9Y3Q8 395 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 DNAJC15Q9Y5T4 150 aa16.77■□□□□ 0.28
LETMD1-220ENST00000549686 PCDH15Q96QU1 1955 aa16.77■□□□□ 0.27
LETMD1-220ENST00000549686 KCNE1BA0A087WTH5 132 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms