RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 SNX8Q9Y5X2 465 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 ADAMTS4O75173 837 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 JRKO75564 520 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 HPRP00739 348 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 UGT2B4P06133 528 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 RCVRNP35243 200 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 KRT20P35900 424 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 KIR3DL1P43629 444 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 RPP38P78345 283 aaKnown RBP12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 GSTM4Q03013 218 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 ABRQ12979 859 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 MAD2L1Q13257 205 aaPredicted RBP12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 TMCO2Q7Z6W1 182 aaPredicted RBP12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 ANKRD13BQ86YJ7 626 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 AADATQ8N5Z0 425 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 GPR26Q8NDV2 337 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 SOCS4Q8WXH5 440 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 SH3KBP1Q96B97 665 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 ZNF641Q96N77 438 aaPredicted RBP12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 TTPALQ9BTX7 342 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 RMND5AQ9H871 391 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 SERHLQ9NQF3 203 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 POU2F3Q9UKI9 436 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 RIMKLBQ9ULI2 386 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 OARD1Q9Y530 152 aa12.04□□□□□ -0.48
SLC38A1-206ENST00000549049 OR2AG2A6NM03 316 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 EFCAB9A8MZ26 197 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 SYN3O14994 580 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 HIST1H2AGP0C0S8 130 aaPredicted RBP12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 ITIH1P19827 911 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 HIST1H2ADP20671 130 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 POU1F1P28069 291 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 CCL23P55773 120 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 CHIT1Q13231 466 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 ZXDCQ2QGD7 858 aaPredicted RBP12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 PRSS36Q5K4E3 855 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 RAVER1Q8IY67 606 aaKnown RBP12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 HIST1H2AHQ96KK5 128 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 HIST1H2AJQ99878 128 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 H2AFJQ9BTM1 129 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 REEP1Q9H902 201 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 TAS2R16Q9NYV7 291 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 PCDHB1Q9Y5F3 818 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 SOBPA7XYQ1 873 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 GAPDHSO14556 408 aaPredicted RBP12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 ALOX12P18054 663 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 TOP3AQ13472 1001 aaPredicted RBP12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 OXA1LQ15070 435 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 FXNQ16595 210 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 ATP13A5Q4VNC0 1218 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 NEK5Q6P3R8 708 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 SNX20Q7Z614 316 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 NLGN4XQ8N0W4 816 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 PJA1Q8NG27 643 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 PIH1D2Q8WWB5 315 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 THG1LQ9NWX6 298 aaKnown RBP12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 THUMPD1Q9NXG2 353 aaKnown RBP12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 ERVK-11Q9UQG0 969 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 BTBD3Q9Y2F9 522 aa12.03□□□□□ -0.48
SLC38A1-206ENST00000549049 NPIPB15A6NHN6 443 aaPredicted RBP12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 SAP18O00422 153 aaKnown RBP12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 CNOT3O75175 753 aaKnown RBP12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 FABP3P05413 133 aa12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 LAMP1P11279 417 aa12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 CCR7P32248 378 aa12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 MAGEA8P43361 318 aa12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 BTG3Q14201 252 aaPredicted RBP12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 ALG1LQ6GMV1 187 aa12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 CYP2U1Q7Z449 544 aa12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 HEATR4Q86WZ0 1026 aa12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 ZSWIM9Q86XI8 627 aa12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 CACTIN-AS1Q8N1I8 211 aa12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 CCDC115Q96NT0 180 aa12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 CHCHD6Q9BRQ6 235 aa12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 TMEM121BQ9BXQ6 578 aaPredicted RBP12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 SMG9Q9H0W8 520 aaKnown RBP12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 DCSTAMPQ9H295 470 aa12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 TRIT1Q9H3H1 467 aaKnown RBP12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 USE1Q9NZ43 259 aa12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 IL37Q9NZH6 218 aa12.02□□□□□ -0.48
SLC38A1-206ENST00000549049 TMEM221A6NGB7 291 aa12.02□□□□□ -0.49
SLC38A1-206ENST00000549049 PCDHGA12O60330 932 aa12.02□□□□□ -0.49
SLC38A1-206ENST00000549049 ERN1O75460 977 aaKnown RBP12.02□□□□□ -0.49
SLC38A1-206ENST00000549049 CHRM5P08912 532 aaPredicted RBP12.02□□□□□ -0.49
SLC38A1-206ENST00000549049 EBLN1P0CF75 366 aa12.02□□□□□ -0.49
SLC38A1-206ENST00000549049 PBLDP30039 288 aaPredicted RBP12.02□□□□□ -0.49
SLC38A1-206ENST00000549049 LIPAP38571 399 aa12.02□□□□□ -0.49
SLC38A1-206ENST00000549049 SERPINB10P48595 397 aa12.02□□□□□ -0.49
SLC38A1-206ENST00000549049 RPS3AP61247 264 aaKnown RBP12.02□□□□□ -0.49
SLC38A1-206ENST00000549049 IRF8Q02556 426 aa12.02□□□□□ -0.49
SLC38A1-206ENST00000549049 COL9A2Q14055 689 aaPredicted RBP12.02□□□□□ -0.49
SLC38A1-206ENST00000549049 SLC44A2Q8IWA5 706 aaPredicted RBP12.02□□□□□ -0.49
SLC38A1-206ENST00000549049 SETD9Q8NE22 299 aa12.02□□□□□ -0.49
SLC38A1-206ENST00000549049 DNASE1L2Q92874 299 aa12.02□□□□□ -0.49
SLC38A1-206ENST00000549049 UPF1Q92900 1129 aaKnown RBP eCLIP12.02□□□□□ -0.497e-13■□□□□ 9.8
SLC38A1-206ENST00000549049 SCAMP4Q969E2 229 aa12.02□□□□□ -0.49
SLC38A1-206ENST00000549049 APOL4Q9BPW4 351 aa12.02□□□□□ -0.49
SLC38A1-206ENST00000549049 KCNH6Q9H252 994 aa12.02□□□□□ -0.49
SLC38A1-206ENST00000549049 GIN1Q9NXP7 522 aa12.02□□□□□ -0.49
SLC38A1-206ENST00000549049 PTPRDP23468 1912 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms