RNA–Protein interactions for RNA: ENST00000548422.1

CDK17-204, Transcript of cyclin dependent kinase 17, humanhuman

TSL 3

Gene CDK17, Length 892 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK17-204ENST00000548422 PDHA2P29803 388 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 SPRP35270 261 aaPredicted RBP8.12□□□□□ -1.11
CDK17-204ENST00000548422 GGT5P36269 586 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 GPX4P36969 197 aaPredicted RBP8.12□□□□□ -1.11
CDK17-204ENST00000548422 CEACAM6P40199 344 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 NSFP46459 744 aaKnown RBP8.12□□□□□ -1.11
CDK17-204ENST00000548422 SERPINB9P50453 376 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.12□□□□□ -1.11
CDK17-204ENST00000548422 TNK2Q07912 1038 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 CUL2Q13617 745 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 GUCA2BQ16661 112 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 UBE2SQ16763 222 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 TRIM60Q495X7 471 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 CYBRD1Q53TN4 286 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 DCAF17Q5H9S7 520 aaPredicted RBP8.12□□□□□ -1.11
CDK17-204ENST00000548422 MDH1BQ5I0G3 518 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 SAMD4BQ5PRF9 694 aaKnown RBP8.12□□□□□ -1.11
CDK17-204ENST00000548422 TPRG1LQ5T0D9 272 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 LIN54Q6MZP7 749 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 ZC3H14Q6PJT7 736 aaKnown RBP8.12□□□□□ -1.11
CDK17-204ENST00000548422 ZDHHC14Q8IZN3 488 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 ABRAQ8N0Z2 381 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 SVOPLQ8N434 492 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 C9orf62Q8N4C0 152 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 PARP16Q8N5Y8 322 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 LRRC17Q8N6Y2 441 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 CELF2-AS1Q8N7Q2 184 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 PAPD5Q8NDF8 572 aaKnown RBP8.12□□□□□ -1.11
CDK17-204ENST00000548422 IPMKQ8NFU5 416 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 OR6X1Q8NH79 312 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 ISL2Q96A47 359 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 KIAA1143Q96AT1 154 aaPredicted RBP8.12□□□□□ -1.11
CDK17-204ENST00000548422 ELP4Q96EB1 424 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 FUBP3Q96I24 572 aaKnown RBP eCLIP8.12□□□□□ -1.11
CDK17-204ENST00000548422 PRMT6Q96LA8 375 aaPredicted RBP8.12□□□□□ -1.11
CDK17-204ENST00000548422 TEPSINQ96N21 525 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 OR52B2Q96RD2 323 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 PAFAH2Q99487 392 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 SLC25A23Q9BV35 468 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 HDHD5Q9BXW7 423 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 CPEB1Q9BZB8 566 aaKnown RBP8.12□□□□□ -1.11
CDK17-204ENST00000548422 ZNF436Q9C0F3 470 aaPredicted RBP8.12□□□□□ -1.11
CDK17-204ENST00000548422 REXO4Q9GZR2 422 aaKnown RBP8.12□□□□□ -1.11
CDK17-204ENST00000548422 FAM49AQ9H0Q0 323 aaPredicted RBP8.12□□□□□ -1.11
CDK17-204ENST00000548422 C2orf40Q9H1Z8 148 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 OSGEPL1Q9H4B0 414 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 ESRP2Q9H6T0 727 aaKnown RBP8.12□□□□□ -1.11
CDK17-204ENST00000548422 WDR41Q9HAD4 459 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 RANGRFQ9HD47 186 aaPredicted RBP8.12□□□□□ -1.11
CDK17-204ENST00000548422 POLE4Q9NR33 117 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 AGPAT4Q9NRZ5 378 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 OPTCQ9UBM4 332 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 MGAT4AQ9UM21 535 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 PCDHA6Q9UN73 950 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 GABRQQ9UN88 632 aa8.12□□□□□ -1.11
CDK17-204ENST00000548422 MGAMO43451 1857 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 CCDC154A6NI56 674 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 MCIDASD6RGH6 385 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 H0YIV9 168 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 hCG_1984214I3L0E3 225 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 DNASE2O00115 360 aaPredicted RBP8.11□□□□□ -1.11
CDK17-204ENST00000548422 PEX10O60683 326 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 MITFO75030 526 aaPredicted RBP8.11□□□□□ -1.11
CDK17-204ENST00000548422 INMTO95050 263 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 DNTTP04053 509 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 TP53P04637 393 aaPredicted RBP8.11□□□□□ -1.11
CDK17-204ENST00000548422 SERPINE1P05121 402 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 COX5BP10606 129 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 APEHP13798 732 aaKnown RBP8.11□□□□□ -1.11
CDK17-204ENST00000548422 POU3F3P20264 500 aaPredicted RBP8.11□□□□□ -1.11
CDK17-204ENST00000548422 PCMT1P22061 227 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 PTAFRP25105 342 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 ITGB8P26012 769 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 CRABP1P29762 137 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 CALCRP30988 508 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 FMO4P31512 558 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 RFC3P40938 356 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 MAN2A2P49641 1150 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 PLK1P53350 603 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 CDH13P55290 713 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 SKP1P63208 163 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 NOMO3P69849 1222 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 MS4A2Q01362 244 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 HSF2Q03933 536 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 SCN1BQ07699 218 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 PPP3CAQ08209 521 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 SPP2Q13103 211 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 ART3Q13508 389 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 TDGQ13569 410 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 DDX39BQ13838 428 aaKnown RBP8.11□□□□□ -1.11
CDK17-204ENST00000548422 CEACAM7Q14002 265 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 VEPH1Q14D04 833 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 POLD3Q15054 466 aaPredicted RBP8.11□□□□□ -1.11
CDK17-204ENST00000548422 NOMO1Q15155 1222 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 PUM3Q15397 648 aaKnown RBP8.11□□□□□ -1.11
CDK17-204ENST00000548422 STXBP2Q15833 593 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 PPP1R3AQ16821 1122 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 ADPRMQ3LIE5 342 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 ATP13A5Q4VNC0 1218 aa8.11□□□□□ -1.11
CDK17-204ENST00000548422 CCDC157Q569K6 752 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms