RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 ABCB9Q9NP78 766 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 NECTIN3Q9NQS3 549 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 FARSBQ9NSD9 589 aaKnown RBP9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 KCTD5Q9NXV2 234 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 TRPC4Q9UBN4 977 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 SCML2Q9UQR0 700 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 PCDHGB3Q9Y5G1 929 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 GREB1LQ9C091 1923 aaPredicted RBP9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 GPR39O43194 453 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 DNAJB5O75953 348 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 IGSF6O95976 241 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 GABARAPL2P60520 117 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 ALDH6A1Q02252 535 aaKnown RBP9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 SMN1Q16637 294 aaKnown RBP9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 CLLU1OSQ5K130 101 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 ZNF57Q68EA5 555 aaPredicted RBP9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 ANKRD34AQ69YU3 496 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 KLHL17Q6TDP4 642 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 TMPRSS11AQ6ZMR5 421 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 DDX53Q86TM3 631 aaKnown RBP9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 LINC01465Q8N7H1 131 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 ARL14EPQ8N8R7 260 aaPredicted RBP9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 DUS3LQ96G46 650 aaKnown RBP9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 HSH2DQ96JZ2 352 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 COQ7Q99807 217 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 SMG9Q9H0W8 520 aaKnown RBP9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 DNAJC11Q9NVH1 559 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 ENOPH1Q9UHY7 261 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 CDH7Q9ULB5 785 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 PMF1-BGLAPU3KQ54 211 aa9.25□□□□□ -0.93
CALCOCO1-210ENST00000548263 OR10H3O60404 316 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 SEC14L2O76054 403 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 MTHFD2P13995 350 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 EPORP19235 508 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 HRH2P25021 359 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 GPC1P35052 558 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 PIGAP37287 484 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 PHC1P78364 1004 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 GRSF1Q12849 480 aaKnown RBP eCLIP9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 DSC3Q14574 896 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 UGT3A2Q3SY77 523 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 CCBE1Q6UXH8 406 aaPredicted RBP9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 MBOAT1Q6ZNC8 495 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 FAM86B1Q8N7N1 296 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 OR4A15Q8NGL6 344 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 PIH1D2Q8WWB5 315 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 FCGR1BQ92637 280 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 MRPS31Q92665 395 aaKnown RBP9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 ALPK1Q96QP1 1244 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 MMP27Q9H306 513 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 SNTG1Q9NSN8 517 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 H2AFY2Q9P0M6 372 aaPredicted RBP9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 INTS6Q9UL03 887 aaKnown RBP9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 DHRS7Q9Y394 339 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 PCDHB14Q9Y5E9 798 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 A0A1B0GTL3 188 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 A0A1B0GVM2 712 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 FAM25AB3EWG3 89 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 FAM25CB3EWG5 89 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 FAM25GB3EWG6 89 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 HAS3O00219 553 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 PLK4O00444 970 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 SNX4O95219 450 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 ANXA4P09525 319 aaPredicted RBP9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 PSMA1P25786 263 aaKnown RBP9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 GABRR2P28476 465 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 IDUAP35475 653 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 SLC15A1P46059 708 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 TUFMP49411 452 aaKnown RBP9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 TUBA1BP68363 451 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 CNTN1Q12860 1018 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 KCNJ8Q15842 424 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 Q6ZSR9 355 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 TUBA1AQ71U36 451 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 TMEM173Q86WV6 379 aaPredicted RBP9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 OR2T11Q8NH01 316 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 ARRDC2Q8TBH0 407 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 SLC22A17Q8WUG5 538 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 PEX13Q92968 403 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 SLC38A4Q969I6 547 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 ZNF583Q96ND8 569 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 IL4I1Q96RQ9 567 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 ATP13A3Q9H7F0 1226 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 TM9SF3Q9HD45 589 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 C14orf119Q9NWQ9 140 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 MOSPD1Q9UJG1 213 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 SSR3Q9UNL2 185 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 ANKDD1BA6NHY2 528 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 ACOX3O15254 700 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 AQP9O43315 295 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 TPD52L2O43399 206 aaKnown RBP9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 RFPL2O75678 378 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 PABPC1P11940 636 aaKnown RBP9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 TCF3P15923 654 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 ITGA2P17301 1181 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 MYL12AP19105 171 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 ITIH1P19827 911 aa9.24□□□□□ -0.93
CALCOCO1-210ENST00000548263 NR4A2P43354 598 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms