RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 FRMD8Q9BZ67 464 aaPredicted RBP4.2□□□□□ -1.74
CBX5-203ENST00000547872 ASB7Q9H672 318 aa4.2□□□□□ -1.74
CBX5-203ENST00000547872 NOD2Q9HC29 1040 aa4.2□□□□□ -1.74
CBX5-203ENST00000547872 Q9N2J8 555 aa4.2□□□□□ -1.74
CBX5-203ENST00000547872 DMAP1Q9NPF5 467 aaPredicted RBP4.2□□□□□ -1.74
CBX5-203ENST00000547872 PNRC2Q9NPJ4 139 aaKnown RBP4.2□□□□□ -1.74
CBX5-203ENST00000547872 TLR8Q9NR97 1041 aaKnown RBP4.2□□□□□ -1.74
CBX5-203ENST00000547872 PDRG1Q9NUG6 133 aa4.2□□□□□ -1.74
CBX5-203ENST00000547872 RRN3Q9NYV6 651 aa4.2□□□□□ -1.74
CBX5-203ENST00000547872 LARSQ9P2J5 1176 aaKnown RBP4.2□□□□□ -1.74
CBX5-203ENST00000547872 SIX4Q9UIU6 781 aa4.2□□□□□ -1.74
CBX5-203ENST00000547872 ANAPC2Q9UJX6 822 aa4.2□□□□□ -1.74
CBX5-203ENST00000547872 GGA2Q9UJY4 613 aa4.2□□□□□ -1.74
CBX5-203ENST00000547872 TP53TG5Q9Y2B4 290 aa4.2□□□□□ -1.74
CBX5-203ENST00000547872 CYP46A1Q9Y6A2 500 aa4.2□□□□□ -1.74
CBX5-203ENST00000547872 COL6A6A6NMZ7 2263 aa4.2□□□□□ -1.74
CBX5-203ENST00000547872 MYO18AQ92614 2054 aaKnown RBP4.2□□□□□ -1.74
CBX5-203ENST00000547872 ZNF106Q9H2Y7 1883 aaKnown RBP4.2□□□□□ -1.74
CBX5-203ENST00000547872 NBPF19A0A087WUL8 3843 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 FAM90A10PA6NDY2 464 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 SAC3D1A6NKF1 404 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 B9A039 149 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 H0YCG3 227 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 STX16-NPEPL1H3BU86 382 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 K7EM74 188 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 STX16O14662 325 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 DUX1O43812 170 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 PIP5K1CO60331 668 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 TBL1XO60907 577 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 CTDNEP1O95476 244 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 NADKO95544 446 aaPredicted RBP4.19□□□□□ -1.74
CBX5-203ENST00000547872 METTL18O95568 372 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 IFNA2P01563 188 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 KLKB1P03952 638 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 RPLP0P05388 317 aaKnown RBP4.19□□□□□ -1.74
CBX5-203ENST00000547872 DLATP10515 647 aaKnown RBP4.19□□□□□ -1.74
CBX5-203ENST00000547872 FCGR2AP12318 317 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 LIFP15018 202 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 TNFRSF1BP20333 461 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 PSMA5P28066 241 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 SEMA3AQ14563 771 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 PRR30Q53SZ7 412 aaPredicted RBP4.19□□□□□ -1.74
CBX5-203ENST00000547872 CAPRIN2Q6IMN6 1127 aaKnown RBP4.19□□□□□ -1.74
CBX5-203ENST00000547872 AADACL2Q6P093 401 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 CRELD2Q6UXH1 353 aaPredicted RBP4.19□□□□□ -1.74
CBX5-203ENST00000547872 MMS22LQ6ZRQ5 1243 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 ACOT1Q86TX2 421 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 SFR1Q86XK3 245 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 SYCP3Q8IZU3 236 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 RBFAQ8N0V3 343 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 CARNMT1Q8N4J0 409 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 Q8N9P0 234 aaPredicted RBP4.19□□□□□ -1.74
CBX5-203ENST00000547872 OR5B17Q8NGF7 314 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 SLC2A14Q8TDB8 520 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 WASF1Q92558 559 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 SMARCD1Q96GM5 515 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 PIWIL1Q96J94 861 aaKnown RBP4.19□□□□□ -1.74
CBX5-203ENST00000547872 ZSCAN31Q96LW9 406 aaPredicted RBP4.19□□□□□ -1.74
CBX5-203ENST00000547872 COG8Q96MW5 612 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 FRG2BQ96QU4 278 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 CCSER1Q9C0I3 900 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 STRADBQ9C0K7 418 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 TMEM245Q9H330 911 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 SMYD3Q9H7B4 428 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 C17orf75Q9HAS0 396 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 NMUR1Q9HB89 426 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 RASSF1Q9NS23 344 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 NLGN3Q9NZ94 848 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 UPB1Q9UBR1 384 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 ITGA11Q9UKX5 1188 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 AGO1Q9UL18 857 aaKnown RBP4.19□□□□□ -1.74
CBX5-203ENST00000547872 SUFUQ9UMX1 484 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 DHDHQ9UQ10 334 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 RAP2CQ9Y3L5 183 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 U3KQA8 63 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 CABIN1Q9Y6J0 2220 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 ANKRD17O75179 2603 aaKnown RBP4.19□□□□□ -1.74
CBX5-203ENST00000547872 ITIH6Q6UXX5 1313 aa4.19□□□□□ -1.74
CBX5-203ENST00000547872 USP9XQ93008 2570 aaPredicted RBP4.18□□□□□ -1.74
CBX5-203ENST00000547872 TRBV5-7A0A0A0MS05 114 aa4.18□□□□□ -1.74
CBX5-203ENST00000547872 GOLGA6L7A0A1B0GV03 622 aa4.18□□□□□ -1.74
CBX5-203ENST00000547872 VWA3AA6NCI4 1184 aa4.18□□□□□ -1.74
CBX5-203ENST00000547872 GAGE12JA6NER3 117 aa4.18□□□□□ -1.74
CBX5-203ENST00000547872 CD8B2A6NJW9 211 aa4.18□□□□□ -1.74
CBX5-203ENST00000547872 MAGEC1O60732 1142 aa4.18□□□□□ -1.74
CBX5-203ENST00000547872 TMCC1O94876 653 aa4.18□□□□□ -1.74
CBX5-203ENST00000547872 GCNT3O95395 438 aa4.18□□□□□ -1.74
CBX5-203ENST00000547872 PENKP01210 267 aaPredicted RBP4.18□□□□□ -1.74
CBX5-203ENST00000547872 GIMD1P0DJR0 217 aa4.18□□□□□ -1.74
CBX5-203ENST00000547872 ZNF18P17022 549 aa4.18□□□□□ -1.74
CBX5-203ENST00000547872 TNNI1P19237 187 aa4.18□□□□□ -1.74
CBX5-203ENST00000547872 WARSP23381 471 aaKnown RBP4.18□□□□□ -1.74
CBX5-203ENST00000547872 PAX3P23760 479 aa4.18□□□□□ -1.74
CBX5-203ENST00000547872 SKIV2L2P42285 1042 aaKnown RBP4.18□□□□□ -1.74
CBX5-203ENST00000547872 RXRGP48443 463 aa4.18□□□□□ -1.74
CBX5-203ENST00000547872 POLD2P49005 469 aa4.18□□□□□ -1.74
CBX5-203ENST00000547872 STK19P49842 368 aaPredicted RBP4.18□□□□□ -1.74
CBX5-203ENST00000547872 ZNF132P52740 706 aa4.18□□□□□ -1.74
CBX5-203ENST00000547872 SLC12A3P55017 1021 aa4.18□□□□□ -1.74
CBX5-203ENST00000547872 ENPP2Q13822 863 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms