RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 TO15178 435 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 TEX28O15482 410 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 KCNN4O15554 427 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 FLRT2O43155 660 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 RIPK2O43353 540 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 GMFGO60234 142 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 NME6O75414 186 aaPredicted RBP4.05□□□□□ -1.76
SCAF11-210ENST00000547654 SNX4O95219 450 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 DIRAS3O95661 229 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 OPN1MWP04001 364 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 OPN1MW2P0DN77 364 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 OPN1MW3P0DN78 364 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 CHRNB1P11230 501 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 NCF1P14598 390 aaPredicted RBP4.05□□□□□ -1.76
SCAF11-210ENST00000547654 PEX19P40855 299 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 MAGEA4P43358 317 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 TDO2P48775 406 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 SMSP52788 366 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 MFAP3P55082 362 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 TAS2R38P59533 333 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 SCGB2A2Q13296 93 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 NFATC4Q14934 902 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 KARSQ15046 597 aaKnown RBP4.05□□□□□ -1.76
SCAF11-210ENST00000547654 TAF1BQ53T94 588 aaPredicted RBP4.05□□□□□ -1.76
SCAF11-210ENST00000547654 PPP6R3Q5H9R7 873 aaPredicted RBP4.05□□□□□ -1.76
SCAF11-210ENST00000547654 RIPPLY2Q5TAB7 128 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 KCTD11Q693B1 232 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 SLC25A24Q6NUK1 477 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 CYB5D1Q6P9G0 228 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 MACC1Q6ZN28 852 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 GPR180Q86V85 440 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 KLHDC8AQ8IYD2 350 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 BEST3Q8N1M1 668 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 FBXW8Q8N3Y1 598 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 SLC5A8Q8N695 610 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 GCSAMQ8N6F7 178 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 PCDH20Q8N6Y1 951 aaKnown RBP4.05□□□□□ -1.76
SCAF11-210ENST00000547654 TEX45Q8NA69 505 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 SLC38A9Q8NBW4 561 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 SLC24A4Q8NFF2 622 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 GPT2Q8TD30 523 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 CKAP2Q8WWK9 683 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 CTNNBL1Q8WYA6 563 aaPredicted RBP4.05□□□□□ -1.76
SCAF11-210ENST00000547654 DNASE2BQ8WZ79 361 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 SGF29Q96ES7 293 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 C14orf79Q96F83 325 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 ZNF582Q96NG8 517 aaPredicted RBP4.05□□□□□ -1.76
SCAF11-210ENST00000547654 GFI1Q99684 422 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 KXD1Q9BQD3 176 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 ATG101Q9BSB4 218 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 C16orf70Q9BSU1 422 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 LMF2Q9BU23 707 aaKnown RBP4.05□□□□□ -1.76
SCAF11-210ENST00000547654 MSTO1Q9BUK6 570 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 SF3B5Q9BWJ5 86 aaKnown RBP4.05□□□□□ -1.76
SCAF11-210ENST00000547654 RAB17Q9H0T7 212 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 RIBC2Q9H4K1 309 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 MMP25Q9NPA2 562 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.05□□□□□ -1.76
SCAF11-210ENST00000547654 RCC2Q9P258 522 aaKnown RBP4.05□□□□□ -1.76
SCAF11-210ENST00000547654 TXNDC16Q9P2K2 825 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 KCNN3Q9UGI6 736 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 UBQLN2Q9UHD9 624 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 FBXL2Q9UKC9 423 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 KDM5BQ9UGL1 1544 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 NCOA1Q15788 1441 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 C3P01024 1663 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 TCF20Q9UGU0 1960 aaKnown RBP4.04□□□□□ -1.76
SCAF11-210ENST00000547654 ILVBLA1L0T0 632 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 H0YGN5 161 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 ANKRD28O15084 1053 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 MDM4O15151 490 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 ATP6V1G1O75348 118 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 APBB3O95704 486 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 PTBP3O95758 552 aaKnown RBP4.04□□□□□ -1.76
SCAF11-210ENST00000547654 AK1P00568 194 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 LCATP04180 440 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 HSPA5P11021 654 aaKnown RBP4.04□□□□□ -1.76
SCAF11-210ENST00000547654 CPA3P15088 417 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 MPZP25189 248 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 PIK3R1P27986 724 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 HNRNPH1P31943 449 aaKnown RBP4.04□□□□□ -1.76
SCAF11-210ENST00000547654 MDH1P40925 334 aaKnown RBP4.04□□□□□ -1.76
SCAF11-210ENST00000547654 APOBEC1P41238 236 aaKnown RBP4.04□□□□□ -1.76
SCAF11-210ENST00000547654 RFX5P48382 616 aaPredicted RBP4.04□□□□□ -1.76
SCAF11-210ENST00000547654 GMPSP49915 693 aaPredicted RBP4.04□□□□□ -1.76
SCAF11-210ENST00000547654 ENTPD1P49961 510 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 ARFIP1P53367 373 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 CTSCP53634 463 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 CD81P60033 236 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 SRP54P61011 504 aaKnown RBP4.04□□□□□ -1.76
SCAF11-210ENST00000547654 ARHGAP1Q07960 439 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 LCP2Q13094 533 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 CTF1Q16619 201 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 DECR1Q16698 335 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 CEP55Q53EZ4 464 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 GCNT6Q5T4J0 391 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 CES4AQ5XG92 561 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 OR6B2Q6IFH4 312 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 LCN10Q6JVE6 187 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 IRGCQ6NXR0 463 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms