RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 LYSMD1Q96S90 227 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 CCM2Q9BSQ5 444 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 TRIM4Q9C037 500 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 CEP44Q9C0F1 390 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 PPT2Q9UMR5 302 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 BTBD3Q9Y2F9 522 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 YBX2Q9Y2T7 364 aaKnown RBP12.33□□□□□ -0.44
SCAF11-209ENST00000547018 IRAK3Q9Y616 596 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 SERPINA1P01009 418 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 CST1P01037 141 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 OPN1SWP03999 348 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 PRNPP04156 253 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 ADRB3P13945 408 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 PSMB5P28074 263 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 KIR3DL1P43629 444 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 BNIP2Q12982 314 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 HEATR4Q86WZ0 1026 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 MMP21Q8N119 569 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 SMARCD2Q92925 531 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 MAGED4Q96JG8 741 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 ZNF583Q96ND8 569 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 LMCD1Q9NZU5 365 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 KCNK6Q9Y257 313 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 SNX8Q9Y5X2 465 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 PCM1Q15154 2024 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 PRAMEF33A0A0G2JMD5 474 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 ANXA6P08133 673 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 ZNF8P17098 575 aaPredicted RBP12.33□□□□□ -0.44
SCAF11-209ENST00000547018 SOAT1P35610 550 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 KRT33BQ14525 404 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 AASDHQ4L235 1098 aaPredicted RBP12.33□□□□□ -0.44
SCAF11-209ENST00000547018 HUS1BQ8NHY5 278 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 TMBIM1Q969X1 311 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 BTBD9Q96Q07 612 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 PLA2G2FQ9BZM2 168 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 NKX2-4Q9H2Z4 354 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 HEBP1Q9NRV9 189 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 IMP3Q9NV31 184 aaKnown RBP12.33□□□□□ -0.44
SCAF11-209ENST00000547018 CCL27Q9Y4X3 112 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 HEMK1Q9Y5R4 338 aaPredicted RBP12.33□□□□□ -0.44
SCAF11-209ENST00000547018 ELOVL7A1L3X0 281 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 H3BSA7 217 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 ANKRD28O15084 1053 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 MAN1A2O60476 641 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 NFATC1O95644 943 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 ENO2P09104 434 aaPredicted RBP12.32□□□□□ -0.44
SCAF11-209ENST00000547018 NUDT7P0C024 238 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 ACP5P13686 325 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 HSD17B1P14061 328 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 ZNF30P17039 623 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 TNFRSF1BP20333 461 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 TBPL1P62380 186 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 PIGFQ07326 219 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 SLBPQ14493 270 aaKnown RBP eCLIP12.32□□□□□ -0.44
SCAF11-209ENST00000547018 NEDD8Q15843 81 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 C9orf64Q5T6V5 341 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 PPP2R2DQ66LE6 453 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 NETO1Q8TDF5 533 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 ZNF480Q8WV37 535 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 ING2Q9H160 280 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 ABCD2Q9UBJ2 740 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 VPS29Q9UBQ0 182 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 SERGEFQ9UGK8 458 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 ACSL6Q9UKU0 697 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 KLHL20Q9Y2M5 609 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 KCNE2Q9Y6J6 123 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 CXCR6O00574 342 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 FPGTO14772 594 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 HNRNPRO43390 633 aaKnown RBP12.32□□□□□ -0.44
SCAF11-209ENST00000547018 HS6ST1O60243 411 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 NUAK1O60285 661 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 CISD3P0C7P0 127 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 NR4A1P22736 598 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 IMPA1P29218 277 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 POLR2IP36954 125 aaKnown RBP12.32□□□□□ -0.44
SCAF11-209ENST00000547018 NKG7Q16617 165 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 FAM83HQ6ZRV2 1179 aaPredicted RBP12.32□□□□□ -0.44
SCAF11-209ENST00000547018 VTCN1Q7Z7D3 282 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 HMGN2P46Q86SG4 172 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 TRAM1L1Q8N609 369 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 TSPAN14Q8NG11 270 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 OR14C36Q8NHC7 312 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 CENPNQ96H22 339 aaPredicted RBP12.32□□□□□ -0.44
SCAF11-209ENST00000547018 ADI1Q9BV57 179 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 NTMT1Q9BV86 223 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 SPNS1Q9H2V7 528 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 CA5BQ9Y2D0 317 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 PLEKHM1Q9Y4G2 1056 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 FADS3Q9Y5Q0 445 aa12.32□□□□□ -0.44
SCAF11-209ENST00000547018 FEZF1A0PJY2 475 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 TCF3P15923 654 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 CD72P21854 359 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 PPM1FP49593 454 aaPredicted RBP12.31□□□□□ -0.44
SCAF11-209ENST00000547018 HNRNPA1L2Q32P51 320 aaKnown RBP12.31□□□□□ -0.44
SCAF11-209ENST00000547018 CNPY1Q3B7I2 92 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 FAM98BQ52LJ0 330 aaKnown RBP12.31□□□□□ -0.44
SCAF11-209ENST00000547018 USP39Q53GS9 565 aaKnown RBP12.31□□□□□ -0.44
SCAF11-209ENST00000547018 HDDC3Q8N4P3 179 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 OTUB1Q96FW1 271 aaPredicted RBP12.31□□□□□ -0.44
SCAF11-209ENST00000547018 ASB16Q96NS5 453 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms