RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 XYLBO75191 536 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 UPK1BO75841 260 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 SCO1O75880 301 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 PRSS56P0CW18 603 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 SLC2A4P14672 509 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 PRPH2P23942 346 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 RGRP47804 291 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 MTPNP58546 118 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 TARDBPQ13148 414 aaKnown RBP eCLIP13.38□□□□□ -0.276e-7■■■■□ 22.7
SLC38A1-204ENST00000546893 COL19A1Q14993 1142 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 PLCL1Q15111 1095 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 HIST2H2ACQ16777 129 aaPredicted RBP13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 YIF1BQ5BJH7 314 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 TBPL2Q6SJ96 375 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 RASAL3Q86YV0 1011 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 TMEM132CQ8N3T6 1108 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 POC5Q8NA72 575 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 SLC22A17Q8WUG5 538 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 THUMPD3Q9BV44 507 aaKnown RBP13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 SOX17Q9H6I2 414 aaPredicted RBP13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 LIMD1Q9UGP4 676 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 STOML2Q9UJZ1 356 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 SERTM1A2A2V5 107 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 OR1I1O60431 355 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 B4GALT3O60512 393 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 PGRP06401 933 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 CSNK1DP48730 415 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 SEPHS1P49903 392 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 KCNQ1P51787 676 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 ARHGDIAP52565 204 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 PPP5CP53041 499 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 IMPG1Q17R60 797 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 ZFP69Q49AA0 526 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 GGTA1PQ4G0N0 100 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 STEAP3Q658P3 488 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 SDE2Q6IQ49 451 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 MACC1Q6ZN28 852 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 R3HCC1LQ7Z5L2 792 aaKnown RBP13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 CFAP52Q8N1V2 620 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 PGBD3Q8N328 593 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 CBARPQ8N350 705 aaPredicted RBP13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 CELF2-AS1Q8N7Q2 184 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 IL17RDQ8NFM7 739 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 FBLIM1Q8WUP2 373 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 SGCDQ92629 289 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 USP7Q93009 1102 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 MUL1Q969V5 352 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 TOE1Q96GM8 510 aaKnown RBP13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 ITCHQ96J02 903 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 GPR63Q9BZJ6 419 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 ADNPQ9H2P0 1102 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 EPS8L2Q9H6S3 715 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 LRTM1Q9HBL6 345 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 ANKHQ9HCJ1 492 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 CCNB1IP1Q9NPC3 277 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 TIGARQ9NQ88 270 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 C1orf109Q9NX04 203 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 MAT2BQ9NZL9 334 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 SAMD4AQ9UPU9 718 aaKnown RBP13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 INVSQ9Y283 1065 aa13.38□□□□□ -0.27
SLC38A1-204ENST00000546893 CENPXA8MT69 81 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 WNT9AO14904 365 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 EPB42P16452 691 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 ELK4P28324 431 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 RPL38P63173 70 aaKnown RBP13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 YBX1P67809 324 aaKnown RBP13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 MVKQ03426 396 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 ABHD18Q0P651 414 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 ABRAXAS2Q15018 415 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 RFTN2Q52LD8 501 aaPredicted RBP13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 ARMC12Q5T9G4 340 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 ZNF691Q5VV52 312 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 SCIMPQ6UWF3 145 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 SPATC1Q76KD6 591 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 RTN4RL1Q86UN2 441 aaPredicted RBP13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 CALHM3Q86XJ0 350 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 CHDHQ8NE62 594 aaPredicted RBP13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 SH3KBP1Q96B97 665 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 MYEOVQ96EZ4 313 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 REXO5Q96IC2 774 aaKnown RBP13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 TM9SF2Q99805 663 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 HTATIP2Q9BUP3 242 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 RPRD1BQ9NQG5 326 aaKnown RBP13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 TOR4AQ9NXH8 423 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 WWOXQ9NZC7 414 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 VAPAQ9P0L0 249 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 WARS2Q9UGM6 360 aaKnown RBP13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 DOCK3Q8IZD9 2030 aa13.37□□□□□ -0.27
SLC38A1-204ENST00000546893 ZFC3H1O60293 1989 aaKnown RBP13.36□□□□□ -0.27
SLC38A1-204ENST00000546893 TRBV5-3A0A0A0MS03 114 aa13.36□□□□□ -0.27
SLC38A1-204ENST00000546893 TRBV5-4A0A0C4DH59 114 aa13.36□□□□□ -0.27
SLC38A1-204ENST00000546893 CBX4O00257 560 aa13.36□□□□□ -0.27
SLC38A1-204ENST00000546893 CKBP12277 381 aa13.36□□□□□ -0.27
SLC38A1-204ENST00000546893 SHMT2P34897 504 aa13.36□□□□□ -0.27
SLC38A1-204ENST00000546893 SERPINB10P48595 397 aa13.36□□□□□ -0.27
SLC38A1-204ENST00000546893 CSNK2BP67870 215 aa13.36□□□□□ -0.27
SLC38A1-204ENST00000546893 KEAP1Q14145 624 aa13.36□□□□□ -0.27
SLC38A1-204ENST00000546893 DPY19L1Q2PZI1 675 aa13.36□□□□□ -0.27
SLC38A1-204ENST00000546893 FAM214AQ32MH5 1076 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms