RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 WDR34Q96EX3 536 aa18.79■□□□□ 0.6
SKP2-208ENST00000546211 TCEAL2Q9H3H9 227 aaPredicted RBP18.79■□□□□ 0.6
SKP2-208ENST00000546211 CCL27Q9Y4X3 112 aa18.79■□□□□ 0.6
SKP2-208ENST00000546211 LRP4O75096 1905 aa18.79■□□□□ 0.6
SKP2-208ENST00000546211 PLXND1Q9Y4D7 1925 aa18.79■□□□□ 0.6
SKP2-208ENST00000546211 SERTM1A2A2V5 107 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 A6NCN8 305 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 TLR4O00206 839 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 JUNDP17535 347 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 VARSP26640 1264 aaKnown RBP18.78■□□□□ 0.6
SKP2-208ENST00000546211 HMGCS1Q01581 520 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 MAD2L1Q13257 205 aaPredicted RBP18.78■□□□□ 0.6
SKP2-208ENST00000546211 LAPTM5Q13571 262 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 CYLC2Q14093 348 aaPredicted RBP18.78■□□□□ 0.6
SKP2-208ENST00000546211 SMU1Q2TAY7 513 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 WDR45BQ5MNZ6 344 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 CATSPEREQ5SY80 951 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 TSSK4Q6SA08 328 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 NXPE4Q6UWF7 544 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 TAF8Q7Z7C8 310 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 C17orf64Q86WR6 236 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 SNX32Q86XE0 403 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 HMGCLL1Q8TB92 370 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 REPS1Q96D71 796 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 BTBD10Q9BSF8 475 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 DUSP15Q9H1R2 295 aaPredicted RBP18.78■□□□□ 0.6
SKP2-208ENST00000546211 XKR8Q9H6D3 395 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 APOBEC3BQ9UH17 382 aaKnown RBP18.78■□□□□ 0.6
SKP2-208ENST00000546211 TAC3Q9UHF0 121 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 KLF15Q9UIH9 416 aa18.78■□□□□ 0.6
SKP2-208ENST00000546211 GYG2O15488 501 aa18.77■□□□□ 0.6
SKP2-208ENST00000546211 NEK2P51955 445 aa18.77■□□□□ 0.6
SKP2-208ENST00000546211 EMX2Q04743 252 aa18.77■□□□□ 0.6
SKP2-208ENST00000546211 CSTF3Q12996 717 aaKnown RBP18.77■□□□□ 0.6
SKP2-208ENST00000546211 AGKQ53H12 422 aa18.77■□□□□ 0.6
SKP2-208ENST00000546211 MED27Q6P2C8 311 aa18.77■□□□□ 0.6
SKP2-208ENST00000546211 RINLQ6ZS11 566 aa18.77■□□□□ 0.6
SKP2-208ENST00000546211 KIF2BQ8N4N8 673 aa18.77■□□□□ 0.6
SKP2-208ENST00000546211 LINC01555Q8NAE3 123 aa18.77■□□□□ 0.6
SKP2-208ENST00000546211 NRTNQ99748 197 aa18.77■□□□□ 0.6
SKP2-208ENST00000546211 C1orf50Q9BV19 199 aa18.77■□□□□ 0.6
SKP2-208ENST00000546211 ACAT2Q9BWD1 397 aa18.77■□□□□ 0.6
SKP2-208ENST00000546211 LRTM1Q9HBL6 345 aa18.77■□□□□ 0.6
SKP2-208ENST00000546211 PRM3Q9NNZ6 103 aa18.77■□□□□ 0.6
SKP2-208ENST00000546211 PRMT8Q9NR22 394 aaPredicted RBP18.77■□□□□ 0.6
SKP2-208ENST00000546211 AIG1Q9NVV5 245 aa18.77■□□□□ 0.6
SKP2-208ENST00000546211 TAAR2Q9P1P5 351 aa18.77■□□□□ 0.6
SKP2-208ENST00000546211 ZNF624Q9P2J8 865 aaPredicted RBP18.77■□□□□ 0.6
SKP2-208ENST00000546211 ICKQ9UPZ9 632 aa18.77■□□□□ 0.6
SKP2-208ENST00000546211 SH2B3Q9UQQ2 575 aa18.77■□□□□ 0.6
SKP2-208ENST00000546211 LAMTOR5O43504 91 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 RSL1D1O76021 490 aaKnown RBP18.76■□□□□ 0.59
SKP2-208ENST00000546211 CDH1P12830 882 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 SLC2A4P14672 509 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 SHMT2P34897 504 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 FNTBP49356 437 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 ACADVLP49748 655 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 DIO3P55073 304 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 GRIK2Q13002 908 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 SLBPQ14493 270 aaKnown RBP eCLIP18.76■□□□□ 0.59
SKP2-208ENST00000546211 C10orf62Q5T681 223 aaPredicted RBP18.76■□□□□ 0.59
SKP2-208ENST00000546211 LAYNQ6UX15 382 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 TRIM48Q8IWZ4 208 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 WDR20Q8TBZ3 569 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 DNASE2BQ8WZ79 361 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 ACPTQ9BZG2 426 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 PELI2Q9HAT8 420 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 SDR39U1Q9NRG7 319 aaPredicted RBP18.76■□□□□ 0.59
SKP2-208ENST00000546211 C1orf109Q9NX04 203 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 TAS2R1Q9NYW7 299 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 NOP53Q9NZM5 478 aaKnown RBP18.76■□□□□ 0.59
SKP2-208ENST00000546211 CCDC167Q9P0B6 97 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 EIF3LQ9Y262 564 aaKnown RBP18.76■□□□□ 0.59
SKP2-208ENST00000546211 TRBV23OR9-2A0A075B6M9 112 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 PRAMEF33A0A0G2JMD5 474 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 A0A1W2PPV9 198 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 OR5K4A6NMS3 321 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 SEC22BO75396 215 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 CSF2P04141 144 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 PCNAP12004 261 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 HSD3B1P14060 373 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 NQO1P15559 274 aaKnown RBP18.76■□□□□ 0.59
SKP2-208ENST00000546211 GPX3P22352 226 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 HSD3B2P26439 372 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 SLC19A1P41440 591 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 MRPL19P49406 292 aaKnown RBP18.76■□□□□ 0.59
SKP2-208ENST00000546211 RPL38P63173 70 aaKnown RBP18.76■□□□□ 0.59
SKP2-208ENST00000546211 DDX39BQ13838 428 aaKnown RBP18.76■□□□□ 0.59
SKP2-208ENST00000546211 PRRT3Q5FWE3 981 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 IYDQ6PHW0 289 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 PAOXQ6QHF9 649 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 ARMCX6Q7L4S7 300 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 WDR5BQ86VZ2 330 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 ZFAND4Q86XD8 727 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 KRT78Q8N1N4 520 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 OR7G3Q8NG95 312 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 LCN9Q8WX39 176 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 UBE2E3Q969T4 207 aa18.76■□□□□ 0.59
SKP2-208ENST00000546211 RAB3IPQ96QF0 476 aaPredicted RBP18.76■□□□□ 0.59
SKP2-208ENST00000546211 RTKNQ9BST9 563 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms