RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 PLEKHG1Q9ULL1 1385 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 DCCP43146 1447 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 ADAMTS13Q76LX8 1427 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 NHSL1Q5SYE7 1610 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 IGHV3OR16-10A0A075B7F0 116 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 ANKUB1A6NFN9 424 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 B4DLN1 442 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 AP3D1O14617 1153 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 IDH3BO43837 385 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 HSPA8P11142 646 aaKnown RBP3.89□□□□□ -1.79
SNHG1-224ENST00000545688 RBMS1P29558 406 aaKnown RBP3.89□□□□□ -1.79
SNHG1-224ENST00000545688 PSMB10P40306 273 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 RPL21P46778 160 aaKnown RBP3.89□□□□□ -1.79
SNHG1-224ENST00000545688 MRPL12P52815 198 aaKnown RBP3.89□□□□□ -1.79
SNHG1-224ENST00000545688 CALCOCO2Q13137 446 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 HERC3Q15034 1050 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 DHRS7BQ6IAN0 325 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-224ENST00000545688 FAM180BQ6P0A1 224 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 TEX38Q6PEX7 206 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 SLC25A47Q6Q0C1 308 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 GPRC5AQ8NFJ5 357 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 CCDC107Q8WV48 283 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 ZNF486Q96H40 463 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-224ENST00000545688 MPP4Q96JB8 637 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 C10orf90Q96M02 699 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 PAFAH2Q99487 392 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 SOSTQ9BQB4 213 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 SERINC1Q9NRX5 453 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 MAN2C1Q9NTJ4 1040 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 PRR34Q9NV39 138 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 SPHK1Q9NYA1 384 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 OR6C2Q9NZP2 312 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 TP53TG3Q9ULZ0 132 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 EFCAB6Q5THR3 1501 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 PCDH11YQ9BZA8 1340 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 ARHGEF5Q12774 1597 aa3.89□□□□□ -1.79
SNHG1-224ENST00000545688 CHD2O14647 1828 aaKnown RBP3.88□□□□□ -1.79
SNHG1-224ENST00000545688 PIK3C2BO00750 1634 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 BLMP54132 1417 aaPredicted RBP3.88□□□□□ -1.79
SNHG1-224ENST00000545688 FEZF1A0PJY2 475 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 OR2A25A4D2G3 310 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 AVILO75366 819 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 DDHD2O94830 711 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 C22orf31O95567 290 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 TNFAIP3P21580 790 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 GCNT1Q02742 428 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 TAF10Q12962 218 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 FASTKD3Q14CZ7 662 aaKnown RBP3.88□□□□□ -1.79
SNHG1-224ENST00000545688 LINC00612Q8N6U2 182 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 Q8NBF4 154 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 OR2L2Q8NH16 312 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 NECTIN4Q96NY8 510 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 CDRT15Q96T59 188 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 RAD9AQ99638 391 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 OLFM1Q99784 485 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 SUCLA2Q9P2R7 463 aaPredicted RBP3.88□□□□□ -1.79
SNHG1-224ENST00000545688 MUTYHQ9UIF7 546 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 TNNQ9UQP3 1299 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 NME7Q9Y5B8 376 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 LMTK2Q8IWU2 1503 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 HCFC1P51610 2035 aa3.88□□□□□ -1.79
SNHG1-224ENST00000545688 EIF2AK4Q9P2K8 1649 aaKnown RBP3.88□□□□□ -1.79
SNHG1-224ENST00000545688 PTCH1Q13635 1447 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 PTPRUQ92729 1446 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 ASXL1Q8IXJ9 1541 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 A0A1W2PPR1 153 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 A0A1W2PR80 420 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 ENO4A6NNW6 628 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 CTDSP2O14595 271 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 SEC24AO95486 1093 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 OR2T7P0C7T2 308 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 TSPY4P0CV99 314 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 TSPY10P0CW01 314 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 CDH3P22223 829 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 PRKACGP22612 351 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 LHCGRP22888 699 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 MNDAP41218 407 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 ZNF415Q09FC8 603 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 LMOD3Q0VAK6 560 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 TNIP1Q15025 636 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 ODF4Q2M2E3 257 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 PDLIM3Q53GG5 364 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-224ENST00000545688 DEFB132Q7Z7B7 95 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 TBC1D1Q86TI0 1168 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-224ENST00000545688 ADIPOR2Q86V24 386 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 FBXL16Q8N461 479 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 OR13C3Q8NGS6 347 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 OR1L3Q8NH93 324 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 PRICKLE1Q96MT3 831 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-224ENST00000545688 RAB11FIP5Q9BXF6 653 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 TRIM6Q9C030 488 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-224ENST00000545688 THAP2Q9H0W7 228 aa3.87□□□□□ -1.79
SNHG1-224ENST00000545688 PPANQ9NQ55 473 aaKnown RBP3.87□□□□□ -1.79
SNHG1-224ENST00000545688 LAS1LQ9Y4W2 734 aaKnown RBP3.87□□□□□ -1.79
SNHG1-224ENST00000545688 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-224ENST00000545688 LAMC1P11047 1609 aa3.86□□□□□ -1.79
SNHG1-224ENST00000545688 MPTX1A8MV57 137 aa3.86□□□□□ -1.79
SNHG1-224ENST00000545688 TSPAN1O60635 241 aa3.86□□□□□ -1.79
SNHG1-224ENST00000545688 GLRA3O75311 464 aa3.86□□□□□ -1.79
SNHG1-224ENST00000545688 GJA1P17302 382 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms