RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 TRBV5-4A0A0C4DH59 114 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 PRMT3O60678 531 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 RFPL2O75678 378 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 PRAMEF1O95521 474 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 LCKP06239 509 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 GPX2P18283 190 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 ITGALP20701 1170 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 CDKN2CP42773 168 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 CTSKP43235 329 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 GJA8P48165 433 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 CAMK2GQ13555 558 aaPredicted RBP8.51□□□□□ -1.05
TDP1-204ENST00000545686 VEZF1Q14119 521 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 DUOXA1Q1HG43 343 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 INO80DQ53TQ3 878 aaPredicted RBP8.51□□□□□ -1.05
TDP1-204ENST00000545686 SLX4IPQ5VYV7 408 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 AHSA2Q719I0 299 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 CBLL1Q75N03 491 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 LRRC70Q7Z2Q7 622 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 ZNF280BQ86YH2 543 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 CCDC71Q8IV32 467 aaPredicted RBP8.51□□□□□ -1.05
TDP1-204ENST00000545686 ZZZ3Q8IYH5 903 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 TCAIMQ8N3R3 496 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 ATG16L2Q8NAA4 619 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 LKAAEAR1Q8TD35 194 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 APH1BQ8WW43 257 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 RPL3LQ92901 407 aaKnown RBP8.51□□□□□ -1.05
TDP1-204ENST00000545686 MYDGFQ969H8 173 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 PLD4Q96BZ4 506 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 FCRL1Q96LA6 429 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 MAGEB10Q96LZ2 347 aaPredicted RBP8.51□□□□□ -1.05
TDP1-204ENST00000545686 TTLL2Q9BWV7 592 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 EHD1Q9H4M9 534 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 SLC32A1Q9H598 525 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 LATS2Q9NRM7 1088 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 KLHL42Q9P2K6 505 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 PPT2Q9UMR5 302 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 RNF6Q9Y252 685 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 MTMR11A4FU01 709 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 CBX4O00257 560 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 EIF3FO00303 357 aaPredicted RBP8.51□□□□□ -1.05
TDP1-204ENST00000545686 GAPDHSO14556 408 aaPredicted RBP8.51□□□□□ -1.05
TDP1-204ENST00000545686 ASNA1O43681 348 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 SLC25A14O95258 325 aaPredicted RBP8.51□□□□□ -1.05
TDP1-204ENST00000545686 PDYNP01213 254 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 ANXA5P08758 320 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 SDC1P18827 310 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 KDELR2P33947 212 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 GGT5P36269 586 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 ATP5C1P36542 298 aaKnown RBP8.51□□□□□ -1.05
TDP1-204ENST00000545686 ETV6P41212 452 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 GDF5P43026 501 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 KIR3DL1P43629 444 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 RPS24P62847 133 aaKnown RBP8.51□□□□□ -1.05
TDP1-204ENST00000545686 FKBP1BP68106 108 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 RPP38P78345 283 aaKnown RBP8.51□□□□□ -1.05
TDP1-204ENST00000545686 ARF5P84085 180 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 VLDLRP98155 873 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 IL1RL1Q01638 556 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 SMN1Q16637 294 aaKnown RBP8.51□□□□□ -1.05
TDP1-204ENST00000545686 SGO1Q5FBB7 561 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 FAM26DQ5JW98 314 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 ZNF362Q5T0B9 420 aaPredicted RBP8.51□□□□□ -1.05
TDP1-204ENST00000545686 STEAP3Q658P3 488 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 NEK5Q6P3R8 708 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 ZNF551Q7Z340 670 aaPredicted RBP8.51□□□□□ -1.05
TDP1-204ENST00000545686 P3H2Q8IVL5 708 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 ENTHD1Q8IYW4 607 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 CSGALNACT1Q8TDX6 532 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 C2orf15Q8WU43 125 aaKnown RBP8.51□□□□□ -1.05
TDP1-204ENST00000545686 SOCS4Q8WXH5 440 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 PROX1Q92786 737 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 PYCR2Q96C36 320 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 RHNO1Q9BSD3 238 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 COPS4Q9BT78 406 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 HTATIP2Q9BUP3 242 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 POLE4Q9NR33 117 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 ABCB10Q9NRK6 738 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 FKBP14Q9NWM8 211 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 THUMPD1Q9NXG2 353 aaKnown RBP8.51□□□□□ -1.05
TDP1-204ENST00000545686 LHX3Q9UBR4 397 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 PSORS1C1Q9UIG5 152 aa8.51□□□□□ -1.05
TDP1-204ENST00000545686 TSR3Q9UJK0 312 aaKnown RBP8.51□□□□□ -1.05
TDP1-204ENST00000545686 DNAH12Q6ZR08 3092 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 KCNE1BA0A087WTH5 132 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 ZBBXA8MT70 800 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 SNPHO15079 494 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 GPR39O43194 453 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 DYRK3O43781 588 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 PCDHGA12O60330 932 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 EPN2O95208 641 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 SNX4O95219 450 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 KCNK5O95279 499 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 CTPS1P17812 591 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 PRPS1L1P21108 318 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 ACRV1P26436 265 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 S100A5P33763 92 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 LIPAP38571 399 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 OR1G1P47890 313 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 C21orf58P58505 322 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 AP1S1P61966 158 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms