RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 CCDC153Q494R4 210 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 FOXR1Q6PIV2 292 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 LCTLQ6UWM7 567 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 RAB11FIP2Q7L804 512 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 EXOC3L1Q86VI1 746 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 C17orf64Q86WR6 236 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 FAM129CQ86XR2 697 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 KMT5CQ86Y97 462 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 PTGR2Q8N8N7 351 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 C19orf47Q8N9M1 422 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 LIN37Q96GY3 246 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 TRAPPC9Q96Q05 1148 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 CD244Q9BZW8 370 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 MKS1Q9NXB0 559 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 DYRK1BQ9Y463 629 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 KIF26BQ2KJY2 2108 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 DCHS1Q96JQ0 3298 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 CCDC187A0A096LP49 1063 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 EFCAB7A8K855 629 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 AGPSO00116 658 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 KLK8O60259 260 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 JMJD7P0C870 316 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 GGT5P36269 586 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SLC6A12P48065 614 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 AGTR2P50052 363 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 YBX1P67809 324 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 HSD11B2P80365 405 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 NAA25Q14CX7 972 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SETDB1Q15047 1291 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 TNFAIP8L3Q5GJ75 292 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 C3orf38Q5JPI3 329 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 TMTC4Q5T4D3 741 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ADCK2Q7Z695 626 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 TMEM151AQ8N4L1 468 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SNX31Q8N9S9 440 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 KLHL6Q8WZ60 621 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 DPH7Q9BTV6 452 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 C12orf65Q9H3J6 166 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 PDE7BQ9NP56 450 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SEMA5BQ9P283 1151 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 OPTCQ9UBM4 332 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 KLK13Q9UKR3 277 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 EMCNQ9ULC0 261 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 PLLPQ9Y342 182 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 LOXL2Q9Y4K0 774 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 KCNE2Q9Y6J6 123 aa13.94□□□□□ -0.18
TNFRSF1A-216ENST00000543995 A8MT66 165 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 PLIN3O60664 434 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 PROCP04070 461 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SBK3P0C264 359 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 MYL2P10916 166 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 NPPBP16860 134 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 NELFEP18615 380 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SPINK2P20155 84 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 GRIA3P42263 894 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 FOXM1Q08050 763 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 EIF3IQ13347 325 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 KCNAB1Q14722 419 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 FIGLAQ6QHK4 219 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 LRRC70Q7Z2Q7 622 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 WDR36Q8NI36 951 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 TCP10LQ8TDR4 215 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 UBTD2Q8WUN7 234 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ZUFSPQ96AP4 578 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 TCTN2Q96GX1 697 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SLC41A2Q96JW4 573 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 OR4K3Q96R72 315 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SCNM1Q9BWG6 230 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ACBD3Q9H3P7 528 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SLC6A20Q9NP91 592 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 KCNK9Q9NPC2 374 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 DNAJC11Q9NVH1 559 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 OCIAD1Q9NX40 245 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SATB2Q9UPW6 733 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ANGPTL3Q9Y5C1 460 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 TNPO3Q9Y5L0 923 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ACTL7BQ9Y614 415 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ADAMTS20P59510 1910 aa13.93□□□□□ -0.18
TNFRSF1A-216ENST00000543995 TARM1B6A8C7 271 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 H7BY64 318 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 PRAMEF10O60809 474 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SASH3O75995 380 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SIX3O95343 332 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ADRB1P08588 477 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 EBLN1P0CF75 366 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 CDH1P12830 882 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 HGFP14210 728 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ATP5F1P24539 256 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 EEF1DP29692 281 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 MAGOHP61326 146 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SH3BP2P78314 561 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 CDC16Q13042 620 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ZIC1Q15915 447 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 PDK4Q16654 411 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 TMPRSS11BQ86T26 416 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SLC22A9Q8IVM8 553 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 KLHDC8AQ8IYD2 350 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 D2HGDHQ8N465 521 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ARMC2Q8NEN0 867 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SLC5A11Q8WWX8 675 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms