RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 SLC5A11Q8WWX8 675 aa11.48□□□□□ -0.57
DDB1-223ENST00000543658 MAGEB10Q96LZ2 347 aaPredicted RBP11.48□□□□□ -0.57
DDB1-223ENST00000543658 MAGEB18Q96M61 343 aa11.48□□□□□ -0.57
DDB1-223ENST00000543658 GFM1Q96RP9 751 aaKnown RBP11.48□□□□□ -0.57
DDB1-223ENST00000543658 TRMOQ9BU70 441 aa11.48□□□□□ -0.57
DDB1-223ENST00000543658 GATA5Q9BWX5 397 aaPredicted RBP11.48□□□□□ -0.57
DDB1-223ENST00000543658 SGPP1Q9BX95 441 aa11.48□□□□□ -0.57
DDB1-223ENST00000543658 C1QTNF3Q9BXJ4 246 aa11.48□□□□□ -0.57
DDB1-223ENST00000543658 MANSC1Q9H8J5 431 aa11.48□□□□□ -0.57
DDB1-223ENST00000543658 IPPKQ9H8X2 491 aa11.48□□□□□ -0.57
DDB1-223ENST00000543658 RAPGEFL1Q9UHV5 662 aa11.48□□□□□ -0.57
DDB1-223ENST00000543658 U3KQA8 63 aa11.48□□□□□ -0.57
DDB1-223ENST00000543658 VPS13AQ96RL7 3174 aa11.48□□□□□ -0.57
DDB1-223ENST00000543658 ASXL3Q9C0F0 2248 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 A0A0J9YY10 115 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 A0A1W2PPV9 198 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 CAPN5O15484 640 aaPredicted RBP11.47□□□□□ -0.57
DDB1-223ENST00000543658 RFPL3O75679 317 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 RASSF9O75901 435 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 HRH2P25021 359 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 GRK3P35626 688 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 SLC1A6P48664 564 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 ARL4DP49703 201 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 CDH13P55290 713 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 ABCE1P61221 599 aaKnown RBP11.47□□□□□ -0.57
DDB1-223ENST00000543658 IRF8Q02556 426 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 LCP2Q13094 533 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 SPIDRQ14159 915 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 HIST2H2ACQ16777 129 aaPredicted RBP11.47□□□□□ -0.57
DDB1-223ENST00000543658 XKR6Q5GH73 641 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 PAGE2BQ5JRK9 111 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 NKAIN2Q5VXU1 208 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 HIST2H2AA3Q6FI13 130 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 HOMEZQ8IX15 550 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 LRRC56Q8IYG6 542 aaPredicted RBP11.47□□□□□ -0.57
DDB1-223ENST00000543658 KIRREL3Q8IZU9 778 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 CKAP2Q8WWK9 683 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 NSUN5Q96P11 429 aaKnown RBP11.47□□□□□ -0.57
DDB1-223ENST00000543658 TGM7Q96PF1 710 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 CD180Q99467 661 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 NRTNQ99748 197 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 LRRN3Q9H3W5 708 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 NOL11Q9H8H0 719 aaKnown RBP11.47□□□□□ -0.57
DDB1-223ENST00000543658 ACTR8Q9H981 624 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 MID1IP1Q9NPA3 183 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 SPHK1Q9NYA1 384 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 KLHL3Q9UH77 587 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 POMT2Q9UKY4 750 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 ASB1Q9Y576 335 aa11.47□□□□□ -0.57
DDB1-223ENST00000543658 TLCD2A6NGC4 264 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 E7EQ34 232 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 HGSO14964 777 aaPredicted RBP11.46□□□□□ -0.57
DDB1-223ENST00000543658 CPNE6O95741 557 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 EBLN1P0CF75 366 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 CDH1P12830 882 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 TSPAN8P19075 237 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 CXCR2P25025 360 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 PRDX3P30048 256 aaKnown RBP11.46□□□□□ -0.57
DDB1-223ENST00000543658 PEBP1P30086 187 aaKnown RBP11.46□□□□□ -0.57
DDB1-223ENST00000543658 HMOX2P30519 316 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 MDH1P40925 334 aaKnown RBP11.46□□□□□ -0.57
DDB1-223ENST00000543658 CCR8P51685 355 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 PKNOX1P55347 436 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 CCL7P80098 99 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 GUCY1A3Q02108 690 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 PRDX1Q06830 199 aaKnown RBP11.46□□□□□ -0.57
DDB1-223ENST00000543658 CHIT1Q13231 466 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 ILKQ13418 452 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 LAPTM5Q13571 262 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 CLPPQ16740 277 aaPredicted RBP11.46□□□□□ -0.57
DDB1-223ENST00000543658 TTC19Q6DKK2 380 aaPredicted RBP11.46□□□□□ -0.57
DDB1-223ENST00000543658 FAM92BQ6ZTR7 304 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 GPRIN3Q6ZVF9 776 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 RPS27LQ71UM5 84 aaKnown RBP11.46□□□□□ -0.57
DDB1-223ENST00000543658 MILR1Q7Z6M3 343 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 KRT78Q8N1N4 520 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 OR2L3Q8NG85 312 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 OR2A1Q8NGT9 310 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 BAHD1Q8TBE0 780 aaPredicted RBP11.46□□□□□ -0.57
DDB1-223ENST00000543658 ZNF75CPQ92670 426 aaPredicted RBP11.46□□□□□ -0.57
DDB1-223ENST00000543658 NEIL2Q969S2 332 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 PTCD3Q96EY7 689 aaKnown RBP11.46□□□□□ -0.57
DDB1-223ENST00000543658 OR2A14Q96R47 310 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 AIF1LQ9BQI0 150 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 EFCAB11Q9BUY7 163 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 PITPNM3Q9BZ71 974 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 RAB33BQ9H082 229 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 GSTO2Q9H4Y5 243 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 PELI2Q9HAT8 420 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 ACSS2Q9NR19 701 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 THAP1Q9NVV9 213 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 SOHLH2Q9NX45 425 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 OGFRQ9NZT2 677 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 ANKMY1Q9P2S6 941 aa11.46□□□□□ -0.57
DDB1-223ENST00000543658 CDV3Q9UKY7 258 aaKnown RBP11.46□□□□□ -0.57
DDB1-223ENST00000543658 LAMA1P25391 3075 aa11.46□□□□□ -0.58
DDB1-223ENST00000543658 ADAMTS20P59510 1910 aa11.45□□□□□ -0.58
DDB1-223ENST00000543658 MN1Q10571 1320 aaPredicted RBP11.45□□□□□ -0.58
DDB1-223ENST00000543658 KLF11O14901 512 aa11.45□□□□□ -0.58
DDB1-223ENST00000543658 B4GAT1O43505 415 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms