RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 KCNAB1Q14722 419 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 CASP8Q14790 479 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 RASA2Q15283 850 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 GPR19Q15760 415 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 PFKFB4Q16877 469 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 DEFB110Q30KQ9 67 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 C18orf21Q32NC0 220 aaPredicted RBP6.08□□□□□ -1.44
LTBR-212ENST00000543542 PTCHD3Q3KNS1 767 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 CCDC153Q494R4 210 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 FBXO48Q5FWF7 155 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 TECRLQ5HYJ1 363 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 ZC3H12BQ5HYM0 836 aaKnown RBP6.08□□□□□ -1.44
LTBR-212ENST00000543542 BEND6Q5SZJ8 279 aaPredicted RBP6.08□□□□□ -1.44
LTBR-212ENST00000543542 DCAF12Q5T6F0 453 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 KIAA1614Q5VZ46 1190 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 C16orf46Q6P387 395 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 FIGLAQ6QHK4 219 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 LCTLQ6UWM7 567 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 LRIG3Q6UXM1 1119 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 CEACAM20Q6UY09 585 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 HDXQ7Z353 690 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 LCA5Q86VQ0 697 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 THOC6Q86W42 341 aaKnown RBP6.08□□□□□ -1.44
LTBR-212ENST00000543542 PPP1R3BQ86XI6 285 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 GPR135Q8IZ08 494 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 LSMEM2Q8N112 164 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 PDPRQ8NCN5 879 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 OR2L3Q8NG85 312 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 OR2A1Q8NGT9 310 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 PPP4R1Q8TF05 950 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 KLHL6Q8WZ60 621 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 USP7Q93009 1102 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 ATP6V1E2Q96A05 226 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 ISL2Q96A47 359 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 RERGQ96A58 199 aaPredicted RBP6.08□□□□□ -1.44
LTBR-212ENST00000543542 ZUFSPQ96AP4 578 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 ESAMQ96AP7 390 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 RHBDF1Q96CC6 855 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 PHF21BQ96EK2 531 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 PRR11Q96HE9 360 aaPredicted RBP6.08□□□□□ -1.44
LTBR-212ENST00000543542 TAAR9Q96RI9 348 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 ATOH8Q96SQ7 321 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 MRPL57Q9BQC6 102 aaKnown RBP6.08□□□□□ -1.44
LTBR-212ENST00000543542 DPH7Q9BTV6 452 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 MENTQ9BUN1 341 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 CAPS2Q9BXY5 557 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 NRSN2Q9GZP1 204 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 ACBD3Q9H3P7 528 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 KCNK9Q9NPC2 374 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 DNAJC11Q9NVH1 559 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 TMEM216Q9P0N5 145 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 PDP2Q9P2J9 529 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 OPTCQ9UBM4 332 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 LGALS13Q9UHV8 139 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 SERTAD3Q9UJW9 196 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 RARRES3Q9UL19 164 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 GRID1Q9ULK0 1009 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 SNX7Q9UNH6 387 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 SLC22A14Q9Y267 594 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 KCNE2Q9Y6J6 123 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 ASXL3Q9C0F0 2248 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 COL27A1Q8IZC6 1860 aaPredicted RBP6.08□□□□□ -1.44
LTBR-212ENST00000543542 A0A0J9YVX5 310 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 A0A1W2PPV9 198 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 B4E171 279 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 TARM1B6A8C7 271 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 E7EQ34 232 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 H7BY64 318 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 TK2O00142 265 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 MAP2K7O14733 419 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 PRICKLE3O43900 615 aaPredicted RBP6.07□□□□□ -1.44
LTBR-212ENST00000543542 BRINP1O60477 761 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 PRAMEF10O60809 474 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 SPAG7O75391 227 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 SERPIND1P05546 499 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 MYL2P10916 166 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 NEFHP12036 1026 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 CDH1P12830 882 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 FOLR1P15328 257 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 EPB42P16452 691 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 GNAZP19086 355 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 HRH2P25021 359 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 ETV5P41161 510 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 TSPAN7P41732 249 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 GDF5P43026 501 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 LSSP48449 732 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 KCNC1P48547 511 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 CCR8P51685 355 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 ALDH18A1P54886 795 aaKnown RBP6.07□□□□□ -1.44
LTBR-212ENST00000543542 ITGA1P56199 1179 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 MC2RQ01718 297 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 CYP4F3Q08477 520 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 CDC16Q13042 620 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 RBBP5Q15291 538 aaKnown RBP6.07□□□□□ -1.44
LTBR-212ENST00000543542 RBBP7Q16576 425 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 PDK4Q16654 411 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 HIST2H2ACQ16777 129 aaPredicted RBP6.07□□□□□ -1.44
LTBR-212ENST00000543542 CDKL4Q5MAI5 379 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 FCRL6Q6DN72 434 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 HIST2H2AA3Q6FI13 130 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms