RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 OR2AG2A6NM03 316 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 FAM25EA8MYX2 175 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 NUDT14O95848 222 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 XKP51811 444 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 STC1P52823 247 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 ZNF613Q6PF04 617 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 ADAMTS15Q8TE58 950 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 LRCH3Q96II8 777 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 NSUN5Q96P11 429 aaKnown RBP18.89■□□□□ 0.61
SUDS3-204ENST00000543473 NECTIN3Q9NQS3 549 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 N6AMT1Q9Y5N5 214 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 MYH11P35749 1972 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 ARVCFO00192 962 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 STX16O14662 325 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 SAGP10523 405 aaPredicted RBP18.89■□□□□ 0.61
SUDS3-204ENST00000543473 PCDH1Q08174 1060 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 RAB6CQ53S08 254 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 GOLGA7Q7Z5G4 137 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 KDM1BQ8NB78 822 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 AP2M1Q96CW1 435 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 ZNF597Q96LX8 424 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 CYP2S1Q96SQ9 504 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 HEPHQ9BQS7 1158 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 RAB6CQ9H0N0 254 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 SRRDQ9UH36 339 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 RBM47A0AV96 593 aaKnown RBP18.89■□□□□ 0.61
SUDS3-204ENST00000543473 GRID2O43424 1007 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 AP1S1P61966 158 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 CREMQ03060 361 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 LHPPQ9H008 270 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 ARMC1Q9NVT9 282 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 RIMKLBQ9ULI2 386 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 MYH13Q9UKX3 1938 aa18.89■□□□□ 0.61
SUDS3-204ENST00000543473 ATG13O75143 517 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 PAPSS2O95340 614 aaPredicted RBP18.88■□□□□ 0.61
SUDS3-204ENST00000543473 SNAI1O95863 264 aaPredicted RBP18.88■□□□□ 0.61
SUDS3-204ENST00000543473 ECDO95905 644 aaPredicted RBP18.88■□□□□ 0.61
SUDS3-204ENST00000543473 MNDAP41218 407 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 PPP5CP53041 499 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 OR4D2P58180 307 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 UNC50Q53HI1 259 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 POMGNT2Q8NAT1 580 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 ZNF778Q96MU6 729 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 CHIAQ9BZP6 476 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 RACGAP1Q9H0H5 632 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 RNF39Q9H2S5 420 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 PTGDR2Q9Y5Y4 395 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 ZNF780BQ9Y6R6 833 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 NME4O00746 187 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 DFNA5O60443 496 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 GABRR2P28476 465 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 GDF5P43026 501 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 PPP2R2BQ00005 443 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 HEPACAMQ14CZ8 416 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 OLFML2AQ68BL7 652 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 FUT10Q6P4F1 479 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 BLOC1S3Q6QNY0 202 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 DCDC5Q6ZRR9 648 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 CCDC28AQ8IWP9 274 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 SLC43A3Q8NBI5 491 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 SLC37A3Q8NCC5 494 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 CRYGNQ8WXF5 182 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 AIF1LQ9BQI0 150 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 OR2B2Q9GZK3 357 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 VPS29Q9UBQ0 182 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 AASSQ9UDR5 926 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 POLR1DQ9Y2S0 133 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 REM1O75628 298 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 NKX2-5P52952 324 aaPredicted RBP18.88■□□□□ 0.61
SUDS3-204ENST00000543473 MLLT6P55198 1093 aaPredicted RBP18.88■□□□□ 0.61
SUDS3-204ENST00000543473 TNFAIP8L2Q6P589 184 aaPredicted RBP18.88■□□□□ 0.61
SUDS3-204ENST00000543473 OR8J3Q8NGG0 315 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 C14orf119Q9NWQ9 140 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 KIAA1522Q9P206 1035 aaPredicted RBP18.88■□□□□ 0.61
SUDS3-204ENST00000543473 GLUD1P00367 558 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 CD247P20963 164 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 OPRL1P41146 370 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 GRIA2P42262 883 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 MAZP56270 477 aaKnown RBP18.88■□□□□ 0.61
SUDS3-204ENST00000543473 HSPB3Q12988 150 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 DUOXA1Q1HG43 343 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 ANKDD1AQ495B1 522 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 FNDC3BQ53EP0 1204 aaKnown RBP18.88■□□□□ 0.61
SUDS3-204ENST00000543473 CRB2Q5IJ48 1285 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 PIGXQ8TBF5 258 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 NPLQ9BXD5 320 aaPredicted RBP18.88■□□□□ 0.61
SUDS3-204ENST00000543473 LMAN2LQ9H0V9 348 aa18.88■□□□□ 0.61
SUDS3-204ENST00000543473 FCF1Q9Y324 198 aaKnown RBP18.88■□□□□ 0.61
SUDS3-204ENST00000543473 LOC730098B7Z3J9 87 aa18.87■□□□□ 0.61
SUDS3-204ENST00000543473 ELFN1P0C7U0 828 aa18.87■□□□□ 0.61
SUDS3-204ENST00000543473 HOXD12P35452 270 aa18.87■□□□□ 0.61
SUDS3-204ENST00000543473 CBLBQ13191 982 aa18.87■□□□□ 0.61
SUDS3-204ENST00000543473 ZNHIT3Q15649 155 aaPredicted RBP18.87■□□□□ 0.61
SUDS3-204ENST00000543473 IFNLR1Q8IU57 520 aaPredicted RBP18.87■□□□□ 0.61
SUDS3-204ENST00000543473 MAPKAP1Q9BPZ7 522 aa18.87■□□□□ 0.61
SUDS3-204ENST00000543473 CTPS2Q9NRF8 586 aa18.87■□□□□ 0.61
SUDS3-204ENST00000543473 TLR6Q9Y2C9 796 aa18.87■□□□□ 0.61
SUDS3-204ENST00000543473 SLC1A7O00341 560 aa18.87■□□□□ 0.61
SUDS3-204ENST00000543473 AGTR2P50052 363 aa18.87■□□□□ 0.61
SUDS3-204ENST00000543473 TIGD5Q53EQ6 642 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms