RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 NPHS1O60500 1241 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 SCGB2A1O75556 95 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 AP2A2O94973 939 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 ITGBL1O95965 494 aaPredicted RBP6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 PFKLP17858 780 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 C5AR1P21730 350 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 NCBP2P52298 156 aaKnown RBP eCLIP6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 CASP9P55211 416 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 HNRNPKP61978 463 aaKnown RBP eCLIP6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 KLF10Q13118 480 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 TRIM25Q14258 630 aaKnown RBP6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 PRKD1Q15139 912 aaPredicted RBP6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 LRRC70Q7Z2Q7 622 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 KRT77Q7Z794 578 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 GLB1L3Q8NCI6 653 aaPredicted RBP6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 PIK3C3Q8NEB9 887 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 TRPV3Q8NET8 790 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 SORCS1Q8WY21 1168 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC47A1Q96FL8 570 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 C7orf26Q96N11 449 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 MFRPQ9BY79 579 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 LMAN1LQ9HAT1 526 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 VPS29Q9UBQ0 182 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC22A14Q9Y267 594 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 ERGIC3Q9Y282 383 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 RP1L1Q8IWN7 2480 aaPredicted RBP6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 A8MUI8 341 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 PRR5-ARHGAP8B1AHC4 643 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 CDC7O00311 574 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 VEGFDO43915 354 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 SEMA4FO95754 770 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 PTGIRP43119 386 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 KHKP50053 298 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 NRLP54845 237 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 ARHGAP8P85298 464 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 C1orf61Q13536 156 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 ZIK1Q3SY52 487 aaPredicted RBP6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 PGBD2Q6P3X8 592 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 GPRIN1Q7Z2K8 1008 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 NUP54Q7Z3B4 507 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 PLCZ1Q86YW0 608 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 MRPL43Q8N983 215 aaKnown RBP6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC2A13Q96QE2 648 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 CITED2Q99967 270 aaPredicted RBP6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 ASH2LQ9UBL3 628 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 ZMIZ1Q9ULJ6 1067 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 A0A1B0GW55 424 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 ELOVL7A1L3X0 281 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 TRIM24O15164 1050 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 HEXBP07686 556 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 DUX4L2P0CJ85 424 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 DUX4L3P0CJ86 424 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 DUX4L4P0CJ87 422 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 DUX4L5P0CJ88 424 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 DUX4L6P0CJ89 424 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 DUX4L7P0CJ90 424 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 POLR2CP19387 275 aaPredicted RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 ETV3P41162 512 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 TUBA4AP68366 448 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 DGCR6Q14129 220 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 ASTE1Q2TB18 679 aaPredicted RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 TMEM25Q86YD3 366 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 PLA2G15Q8NCC3 412 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 C3orf58Q8NDZ4 430 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 SETD6Q8TBK2 473 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 FAM216AQ8WUB2 273 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC13A3Q8WWT9 602 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 MR1Q95460 341 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 GLYATL1Q969I3 302 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 IGSF8Q969P0 613 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 TMEM125Q96AQ2 219 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 DUSP26Q9BV47 211 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 DUX4Q9UBX2 424 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 GPR34Q9UPC5 381 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 DNMT3AQ9Y6K1 912 aaPredicted RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 ATXN2Q99700 1313 aaKnown RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 TTC34A8MYJ7 566 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 DUX1O43812 170 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 ADAMTS4O75173 837 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 TNFAIP8O95379 198 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 ITGB1P05556 798 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 SUOXP51687 545 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 STC1P52823 247 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 BTN3A2P78410 334 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 NFE2L1Q14494 772 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 FRG2Q64ET8 278 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 AGTRAPQ6RW13 159 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 TMIGD1Q6UXZ0 262 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 ZNF598Q86UK7 904 aaKnown RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 IQCKQ8N0W5 287 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 NAT8LQ8N9F0 302 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 KCNN1Q92952 543 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 MOGAT1Q96PD6 335 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 FRG2BQ96QU4 278 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 HDHD2Q9H0R4 259 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 RAPGEFL1Q9UHV5 662 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 PHF11Q9UIL8 331 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 GJD2Q9UKL4 321 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 HCFC2Q9Y5Z7 792 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 COL16A1Q07092 1604 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms