RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 TAPBPO15533 448 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 PLIN3O60664 434 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 KATNA1O75449 491 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 NCF1P14598 390 aaPredicted RBP11.73□□□□□ -0.53
DDX55-210ENST00000543016 NPPBP16860 134 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 GNAZP19086 355 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 GMPRP36959 345 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 TSPAN7P41732 249 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 PDX1P52945 283 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 SLC18A1P54219 525 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 ACY1Q03154 408 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 PCDH1Q08174 1060 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 ASPHQ12797 758 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 TARDBPQ13148 414 aaKnown RBP eCLIP11.73□□□□□ -0.53
DDX55-210ENST00000543016 TSTA3Q13630 321 aaPredicted RBP11.73□□□□□ -0.53
DDX55-210ENST00000543016 PFKFB4Q16877 469 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 ZC3H12BQ5HYM0 836 aaKnown RBP11.73□□□□□ -0.53
DDX55-210ENST00000543016 SNAP47Q5SQN1 464 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 SUSD1Q6UWL2 747 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 ZYG11AQ6WRX3 759 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 ERMP1Q7Z2K6 904 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 TMPRSS9Q7Z410 1059 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 EXOC3L1Q86VI1 746 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 THOC6Q86W42 341 aaKnown RBP11.73□□□□□ -0.53
DDX55-210ENST00000543016 HOMEZQ8IX15 550 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 D2HGDHQ8N465 521 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 CHCHD4Q8N4Q1 142 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 C2orf73Q8N5S3 287 aaPredicted RBP11.73□□□□□ -0.53
DDX55-210ENST00000543016 TBC1D19Q8N5T2 526 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 PPFIBP2Q8ND30 876 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 ABHD11Q8NFV4 315 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 OR8K5Q8NH50 307 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 EXT2Q93063 718 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 C1QTNF3Q9BXJ4 246 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 PITHD1Q9GZP4 211 aaPredicted RBP11.73□□□□□ -0.53
DDX55-210ENST00000543016 EHD1Q9H4M9 534 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 DNAJC11Q9NVH1 559 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 TMEM9Q9P0T7 183 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 CPSF2Q9P2I0 782 aaKnown RBP11.73□□□□□ -0.53
DDX55-210ENST00000543016 OPTCQ9UBM4 332 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 KLHL3Q9UH77 587 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 TAC3Q9UHF0 121 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 DYRK1BQ9Y463 629 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 PCDHGA8Q9Y5G5 932 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 IGHV5-51A0A0C4DH38 117 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 KRT87PA6NCN2 255 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 SLC9B1P1A6NJY1 282 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 AGPSO00116 658 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 TK2O00142 265 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 PRPF4O43172 522 aaKnown RBP eCLIP11.72□□□□□ -0.53
DDX55-210ENST00000543016 KIF1CO43896 1103 aaKnown RBP11.72□□□□□ -0.53
DDX55-210ENST00000543016 TYROBPO43914 113 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 WDR47O94967 919 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 PROCP04070 461 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 MYL2P10916 166 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 CXCR2P25025 360 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 GRK3P35626 688 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 GRIA3P42263 894 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 CCR8P51685 355 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 PRKAA2P54646 552 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 RAB15P59190 212 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 PPP1CAP62136 330 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 CDC16Q13042 620 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 IL11RAQ14626 422 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 PDK4Q16654 411 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 ZXDCQ2QGD7 858 aaPredicted RBP11.72□□□□□ -0.53
DDX55-210ENST00000543016 FIGLAQ6QHK4 219 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 IGF2-ASQ6U949 168 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 CDHR3Q6ZTQ4 885 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 RAB11FIP2Q7L804 512 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 B3GNT8Q7Z7M8 397 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 TAX1BP1Q86VP1 789 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 LSMEM2Q8N112 164 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 PTGR2Q8N8N7 351 aaPredicted RBP11.72□□□□□ -0.53
DDX55-210ENST00000543016 C19orf47Q8N9M1 422 aaKnown RBP11.72□□□□□ -0.53
DDX55-210ENST00000543016 SLC5A11Q8WWX8 675 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 SREK1Q8WXA9 508 aaKnown RBP11.72□□□□□ -0.53
DDX55-210ENST00000543016 TLCD1Q96CP7 247 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 THAP11Q96EK4 314 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 MAGEB10Q96LZ2 347 aaPredicted RBP11.72□□□□□ -0.53
DDX55-210ENST00000543016 FCRL4Q96PJ5 515 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 NRTNQ99748 197 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 SH3GL2Q99962 352 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 ZPBPQ9BS86 351 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 TMEM79Q9BSE2 394 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 NRSN2Q9GZP1 204 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 PELI2Q9HAT8 420 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 FANCEQ9HB96 536 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 FBXO8Q9NRD0 319 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 SOHLH2Q9NX45 425 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 SLC22A14Q9Y267 594 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 NEUROG3Q9Y4Z2 214 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 ANKRD12Q6UB98 2062 aa11.72□□□□□ -0.53
DDX55-210ENST00000543016 SPTBN2O15020 2390 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 PCM1Q15154 2024 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 OR2A25A4D2G3 310 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 A8MT66 165 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 A8MU76 341 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 FOXO6A8MYZ6 492 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 HMGB1P1B2RPK0 211 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms