RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 DNASE2BQ8WZ79 361 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 ATP6V0A1Q93050 837 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 PTP4A1Q93096 173 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 MR1Q95460 341 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 PHF21AQ96BD5 680 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 SPACA9Q96E40 222 aaPredicted RBP3.08□□□□□ -1.92
USP28-210ENST00000542033 LINGO1Q96FE5 620 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 HES6Q96HZ4 224 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 LINC00615Q96LM1 132 aaPredicted RBP3.08□□□□□ -1.92
USP28-210ENST00000542033 MLPHQ9BV36 600 aaPredicted RBP3.08□□□□□ -1.92
USP28-210ENST00000542033 TUBB2BQ9BVA1 445 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 SPZ1Q9BXG8 430 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 FUT8Q9BYC5 575 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 KRTAP2-2Q9BYT5 123 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 FAM129AQ9BZQ8 928 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 NSRP1Q9H0G5 558 aaKnown RBP3.08□□□□□ -1.92
USP28-210ENST00000542033 TMEM165Q9HC07 324 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 CHMP1AQ9HD42 196 aaPredicted RBP3.08□□□□□ -1.92
USP28-210ENST00000542033 PDRG1Q9NUG6 133 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 FKBP14Q9NWM8 211 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 MIS18AQ9NYP9 233 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 TAS2R14Q9NYV8 317 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 CCPG1Q9ULG6 757 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 TMCO1Q9UM00 188 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 LIPT1Q9Y234 373 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 TMEM184BQ9Y519 407 aaPredicted RBP3.08□□□□□ -1.92
USP28-210ENST00000542033 ELP1O95163 1332 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 ZNF541Q9H0D2 1346 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 CARMIL1Q5VZK9 1371 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 NCOA3Q9Y6Q9 1424 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 POLR1AO95602 1720 aaPredicted RBP3.07□□□□□ -1.92
USP28-210ENST00000542033 A0A1W2PP11 408 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 E9PMD0 336 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 TMEM189-UBE2V1I3L0A0 370 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 BMPR1BO00238 502 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 MCF2LO15068 1137 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 IDH3BO43837 385 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 FGF17O60258 216 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 NMT2O60551 498 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 ZWINTO95229 277 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 BMP10O95393 424 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 IGKV3-20P01619 116 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 IGLV2-11P01706 119 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 THEGLP0DJG4 465 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 EEF1B2P24534 225 aaKnown RBP3.07□□□□□ -1.92
USP28-210ENST00000542033 HRH2P25021 359 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 AHRP35869 848 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 ZNF75DP51815 510 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 CDH13P55290 713 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 SPOCK1Q08629 439 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 DMPKQ09013 629 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 ARL16Q0P5N6 197 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 ILF3Q12906 894 aaKnown RBP eCLIP3.07□□□□□ -1.92
USP28-210ENST00000542033 GAGE5Q13069 117 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 GAGE6Q13070 117 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 UBE2V1Q13404 147 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 PPIGQ13427 754 aaKnown RBP eCLIP3.07□□□□□ -1.92
USP28-210ENST00000542033 SNX1Q13596 522 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 NFE2L1Q14494 772 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 SMU1Q2TAY7 513 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 TWISTNBQ3B726 338 aaPredicted RBP3.07□□□□□ -1.92
USP28-210ENST00000542033 C2orf76Q3KRA6 126 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 FAM98BQ52LJ0 330 aaKnown RBP3.07□□□□□ -1.92
USP28-210ENST00000542033 ASPRV1Q53RT3 343 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 NHSL2Q5HYW2 709 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 SIRPB2Q5JXA9 342 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 CCDC183Q5T5S1 534 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 NDUFAF5Q5TEU4 345 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 C6orf163Q5TEZ5 329 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 STPG1Q5TH74 334 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 TMEM211Q6ICI0 200 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 C8orf74Q6P047 294 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 ZNF449Q6P9G9 518 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 MOXD1Q6UVY6 613 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 NCCRP1Q6ZVX7 275 aaPredicted RBP3.07□□□□□ -1.92
USP28-210ENST00000542033 OTOAQ7RTW8 1153 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 DGLUCYQ7Z3D6 616 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 NANOGNBQ7Z5D8 188 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 GBGT1Q8N5D6 347 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 TRIML2Q8N7C3 387 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 SPERTQ8NA61 448 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 OR8H1Q8NGG4 311 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 OR52I2Q8NH67 350 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 FIBINQ8TAL6 211 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 MGARPQ8TDB4 240 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 ATL1Q8WXF7 558 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 CORO2AQ92828 525 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 SPDL1Q96EA4 605 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 NRBF2Q96F24 287 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 ANKRD27Q96NW4 1050 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 DDOQ99489 341 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 JPH2Q9BR39 696 aaPredicted RBP3.07□□□□□ -1.92
USP28-210ENST00000542033 CNOT10Q9H9A5 744 aaKnown RBP3.07□□□□□ -1.92
USP28-210ENST00000542033 ADPRHL2Q9NX46 363 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 TAAR2Q9P1P5 351 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 KLHL9Q9P2J3 617 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 SLC24A2Q9UI40 661 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 ATPIF1Q9UII2 106 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 LEF1Q9UJU2 399 aaPredicted RBP3.07□□□□□ -1.92
USP28-210ENST00000542033 FAF1Q9UNN5 650 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms