RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 MAP3K7O43318 606 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 CPNE3O75131 537 aaKnown RBP9.33□□□□□ -0.92
YBX3-212ENST00000542002 C8GP07360 202 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 CCNYL3P0C7X3 344 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 NPPBP16860 134 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 ZNF37AP17032 561 aaPredicted RBP9.33□□□□□ -0.92
YBX3-212ENST00000542002 CYP2A7P20853 494 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 RPA3P35244 121 aaPredicted RBP9.33□□□□□ -0.92
YBX3-212ENST00000542002 HSD17B2P37059 387 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 GP5P40197 560 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 KCNC1P48547 511 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 RGS4P49798 205 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 FOXL2P58012 376 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 RPS18P62269 152 aaKnown RBP9.33□□□□□ -0.92
YBX3-212ENST00000542002 TBR1Q16650 682 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 PPP1R3AQ16821 1122 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 C18orf21Q32NC0 220 aaPredicted RBP9.33□□□□□ -0.92
YBX3-212ENST00000542002 PTCHD3Q3KNS1 767 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 C1orf189Q5VU69 101 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 ICE2Q659A1 982 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 ZNF425Q6IV72 752 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 CYB5D1Q6P9G0 228 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 AGTRAPQ6RW13 159 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 PAQR7Q86WK9 346 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 RELL1Q8IUW5 271 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 CTAGE3PQ8IX95 158 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 SYTL1Q8IYJ3 562 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 MYO1HQ8N1T3 1032 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 CEP112Q8N8E3 955 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 EXD3Q8N9H8 876 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 EXTL1Q92935 676 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 CLIP3Q96DZ5 547 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 LRFN5Q96NI6 719 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 OR4K3Q96R72 315 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 GPR22Q99680 433 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 RBBP8Q99708 897 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 CPNE1Q99829 537 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 PLCD4Q9BRC7 762 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 FANCEQ9HB96 536 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 ENAMQ9NRM1 1142 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 SLC22A11Q9NSA0 550 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 INTS7Q9NVH2 962 aaKnown RBP9.33□□□□□ -0.92
YBX3-212ENST00000542002 CUEDC1Q9NWM3 386 aaPredicted RBP9.33□□□□□ -0.92
YBX3-212ENST00000542002 DHCR7Q9UBM7 475 aaKnown RBP9.33□□□□□ -0.92
YBX3-212ENST00000542002 TAC3Q9UHF0 121 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 PTPRQQ9UMZ3 2332 aa9.33□□□□□ -0.92
YBX3-212ENST00000542002 A0A0J9YVX5 310 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 NPEPPSL1A6NEC2 478 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 H7BY64 318 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 ZSCAN9O15535 394 aaPredicted RBP9.32□□□□□ -0.92
YBX3-212ENST00000542002 CNOT3O75175 753 aaKnown RBP9.32□□□□□ -0.92
YBX3-212ENST00000542002 KATNA1O75449 491 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 GUCA1CO95843 209 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 MT-ND3P03897 115 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 FAM153BP0C7A2 387 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 RHOXF2BP0C7M4 288 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 PRKAR1AP10644 381 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 CMPK1P30085 196 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 VSX2P58304 361 aaPredicted RBP9.32□□□□□ -0.92
YBX3-212ENST00000542002 POU4F1Q01851 419 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 DLG1Q12959 904 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 SP140Q13342 867 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 NAE1Q13564 534 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 DNASE1L3Q13609 305 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 ERV3-1Q14264 604 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 USP10Q14694 798 aaKnown RBP9.32□□□□□ -0.92
YBX3-212ENST00000542002 ZKSCAN8Q15776 578 aaPredicted RBP9.32□□□□□ -0.92
YBX3-212ENST00000542002 FAM153CQ494X1 144 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 WASHC2DQ5SRD0 308 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 GRTP1Q5TC63 336 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 LRRC8EQ6NSJ5 796 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 RHBDD2Q6NTF9 364 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 PLD3Q8IV08 490 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 SHISA5Q8N114 240 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 RAB42Q8N4Z0 105 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 STARD8Q92502 1023 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 MR1Q95460 341 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 PYCR2Q96C36 320 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 MRRFQ96E11 262 aaKnown RBP9.32□□□□□ -0.92
YBX3-212ENST00000542002 UBXN10Q96LJ8 280 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 PRAP1Q96NZ9 151 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 GBP5Q96PP8 586 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 RHOXF2Q9BQY4 288 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 SGPP1Q9BX95 441 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 SEMA4CQ9C0C4 833 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 CDC42EP4Q9H3Q1 356 aaKnown RBP9.32□□□□□ -0.92
YBX3-212ENST00000542002 ACTL8Q9H568 366 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 L2HGDHQ9H9P8 463 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 GPAMQ9HCL2 828 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 MRPS30Q9NP92 439 aaKnown RBP9.32□□□□□ -0.92
YBX3-212ENST00000542002 NSMCE4AQ9NXX6 385 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 UTP6Q9NYH9 597 aaKnown RBP9.32□□□□□ -0.92
YBX3-212ENST00000542002 NFU1Q9UMS0 254 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 FARSAQ9Y285 508 aaKnown RBP9.32□□□□□ -0.92
YBX3-212ENST00000542002 PCDHGA6Q9Y5G7 932 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 ZFYVE26Q68DK2 2539 aa9.32□□□□□ -0.92
YBX3-212ENST00000542002 FITM1A5D6W6 292 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 ZNF891A8MT65 544 aaPredicted RBP9.31□□□□□ -0.92
YBX3-212ENST00000542002 H0YGG7 62 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 HAT1O14929 419 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms