RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 ZNF883P0CG24 379 aa26.89■■□□□ 1.9
CCM2-218ENST00000541586 T-ENOLP0DO92 83 aa26.89■■□□□ 1.9
CCM2-218ENST00000541586 SCTRP47872 440 aa26.89■■□□□ 1.9
CCM2-218ENST00000541586 CDC16Q13042 620 aa26.89■■□□□ 1.9
CCM2-218ENST00000541586 KRT72Q14CN4 511 aa26.89■■□□□ 1.9
CCM2-218ENST00000541586 TMEM198Q66K66 360 aa26.89■■□□□ 1.9
CCM2-218ENST00000541586 TREML1Q86YW5 311 aa26.89■■□□□ 1.9
CCM2-218ENST00000541586 KLHDC8AQ8IYD2 350 aa26.89■■□□□ 1.9
CCM2-218ENST00000541586 SDR16C5Q8N3Y7 309 aa26.89■■□□□ 1.9
CCM2-218ENST00000541586 PPFIBP2Q8ND30 876 aa26.89■■□□□ 1.9
CCM2-218ENST00000541586 ZDHHC1Q8WTX9 485 aa26.89■■□□□ 1.9
CCM2-218ENST00000541586 ZNF480Q8WV37 535 aa26.89■■□□□ 1.9
CCM2-218ENST00000541586 ARL8BQ9NVJ2 186 aa26.89■■□□□ 1.9
CCM2-218ENST00000541586 PTPRZ1P23471 2315 aaPredicted RBP26.89■■□□□ 1.89
CCM2-218ENST00000541586 LINC00032P0C843 101 aa26.88■■□□□ 1.89
CCM2-218ENST00000541586 HGFP14210 728 aa26.88■■□□□ 1.89
CCM2-218ENST00000541586 TCHHL1Q5QJ38 904 aaPredicted RBP26.88■■□□□ 1.89
CCM2-218ENST00000541586 THOC6Q86W42 341 aaKnown RBP26.88■■□□□ 1.89
CCM2-218ENST00000541586 DCUN1D3Q8IWE4 304 aa26.88■■□□□ 1.89
CCM2-218ENST00000541586 OR56A3Q8NH54 315 aa26.88■■□□□ 1.89
CCM2-218ENST00000541586 OR5K2Q8NHB8 316 aa26.88■■□□□ 1.89
CCM2-218ENST00000541586 MED8Q96G25 268 aa26.88■■□□□ 1.89
CCM2-218ENST00000541586 TRPS1Q9UHF7 1281 aa26.88■■□□□ 1.89
CCM2-218ENST00000541586 BTBD3Q9Y2F9 522 aa26.88■■□□□ 1.89
CCM2-218ENST00000541586 RNF11Q9Y3C5 154 aa26.88■■□□□ 1.89
CCM2-218ENST00000541586 GIMD1P0DJR0 217 aa26.87■■□□□ 1.89
CCM2-218ENST00000541586 ALPPL2P10696 532 aa26.87■■□□□ 1.89
CCM2-218ENST00000541586 GRB7Q14451 532 aa26.87■■□□□ 1.89
CCM2-218ENST00000541586 STPG1Q5TH74 334 aa26.87■■□□□ 1.89
CCM2-218ENST00000541586 LARP4Q71RC2 724 aaKnown RBP eCLIP26.87■■□□□ 1.899e-6■■■■■ 29.6
CCM2-218ENST00000541586 PATE1Q8WXA2 126 aa26.87■■□□□ 1.89
CCM2-218ENST00000541586 RAD51AP1Q96B01 352 aa26.87■■□□□ 1.89
CCM2-218ENST00000541586 ARHGEF17Q96PE2 2063 aaPredicted RBP26.87■■□□□ 1.89
CCM2-218ENST00000541586 TRIM38O00635 465 aa26.87■■□□□ 1.89
CCM2-218ENST00000541586 UNC5CO95185 931 aa26.87■■□□□ 1.89
CCM2-218ENST00000541586 RPN2P04844 631 aa26.87■■□□□ 1.89
CCM2-218ENST00000541586 SYTL1Q8IYJ3 562 aa26.87■■□□□ 1.89
CCM2-218ENST00000541586 RHBDD1Q8TEB9 315 aa26.87■■□□□ 1.89
CCM2-218ENST00000541586 C12orf66Q96MD2 445 aa26.87■■□□□ 1.89
CCM2-218ENST00000541586 INSM2Q96T92 566 aaPredicted RBP26.87■■□□□ 1.89
CCM2-218ENST00000541586 DUSP23Q9BVJ7 150 aa26.87■■□□□ 1.89
CCM2-218ENST00000541586 AKTIPQ9H8T0 292 aa26.87■■□□□ 1.89
CCM2-218ENST00000541586 ACTR8Q9H981 624 aa26.87■■□□□ 1.89
CCM2-218ENST00000541586 TXLNGQ9NUQ3 528 aa26.87■■□□□ 1.89
CCM2-218ENST00000541586 NLGN3Q9NZ94 848 aa26.87■■□□□ 1.89
CCM2-218ENST00000541586 SCHIP1Q9P0W5 487 aaPredicted RBP26.87■■□□□ 1.89
CCM2-218ENST00000541586 G3BP2Q9UN86 482 aaKnown RBP26.87■■□□□ 1.89
CCM2-218ENST00000541586 FAM186AA6NE01 2351 aa26.87■■□□□ 1.89
CCM2-218ENST00000541586 CLDN9O95484 217 aa26.86■■□□□ 1.89
CCM2-218ENST00000541586 SLC14A1Q13336 389 aa26.86■■□□□ 1.89
CCM2-218ENST00000541586 CLCA4Q14CN2 919 aa26.86■■□□□ 1.89
CCM2-218ENST00000541586 TBCCQ15814 346 aa26.86■■□□□ 1.89
CCM2-218ENST00000541586 CHCHD4Q8N4Q1 142 aa26.86■■□□□ 1.89
CCM2-218ENST00000541586 CATSPER2Q96P56 530 aa26.86■■□□□ 1.89
CCM2-218ENST00000541586 TRIT1Q9H3H1 467 aaKnown RBP26.86■■□□□ 1.89
CCM2-218ENST00000541586 ACTR5Q9H9F9 607 aaPredicted RBP26.86■■□□□ 1.89
CCM2-218ENST00000541586 TDRKHQ9Y2W6 561 aaKnown RBP26.86■■□□□ 1.89
CCM2-218ENST00000541586 PCDHGB2Q9Y5G2 931 aa26.86■■□□□ 1.89
CCM2-218ENST00000541586 SH3BP5O60239 455 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 MYF5P13349 255 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 F3P13726 295 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 CD59P13987 128 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 HMOX2P30519 316 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 HTR6P50406 440 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 NCALDP61601 193 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 PRKG2Q13237 762 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 C6orf132Q5T0Z8 1188 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 DUS1LQ6P1R4 473 aaKnown RBP26.85■■□□□ 1.89
CCM2-218ENST00000541586 SCIMPQ6UWF3 145 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 MYLK4Q86YV6 388 aaPredicted RBP26.85■■□□□ 1.89
CCM2-218ENST00000541586 NAGSQ8N159 534 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 OR4C6Q8NH72 309 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 MARK4Q96L34 752 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 OR4K3Q96R72 315 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 ZNF385DQ9H6B1 395 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 POLG2Q9UHN1 485 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 PLAGL1Q9UM63 463 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 OR52A4PA6NMU1 304 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 SIGLEC6O43699 453 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 ATP5HO75947 161 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 XKR7Q5GH72 579 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 CHSY3Q70JA7 882 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 TBC1D21Q8IYX1 336 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 PTCD3Q96EY7 689 aaKnown RBP26.85■■□□□ 1.89
CCM2-218ENST00000541586 NSL1Q96IY1 281 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 CAMK1GQ96NX5 476 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 CCT7Q99832 543 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 TUBB6Q9BUF5 446 aa26.85■■□□□ 1.89
CCM2-218ENST00000541586 ASCC3Q8N3C0 2202 aaKnown RBP26.84■■□□□ 1.89
CCM2-218ENST00000541586 FFAR3O14843 346 aa26.84■■□□□ 1.89
CCM2-218ENST00000541586 GPR42O15529 346 aa26.84■■□□□ 1.89
CCM2-218ENST00000541586 PRAMEF4O60810 478 aa26.84■■□□□ 1.89
CCM2-218ENST00000541586 HALP42357 657 aa26.84■■□□□ 1.89
CCM2-218ENST00000541586 GRK6P43250 576 aa26.84■■□□□ 1.89
CCM2-218ENST00000541586 PNLIPRP1P54315 467 aa26.84■■□□□ 1.89
CCM2-218ENST00000541586 TBPL1P62380 186 aa26.84■■□□□ 1.89
CCM2-218ENST00000541586 PRAMEF9Q5VWM5 478 aa26.84■■□□□ 1.89
CCM2-218ENST00000541586 IYDQ6PHW0 289 aa26.84■■□□□ 1.89
CCM2-218ENST00000541586 DBX2Q6ZNG2 339 aa26.84■■□□□ 1.89
CCM2-218ENST00000541586 LRRC56Q8IYG6 542 aaPredicted RBP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms