RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 FOPNLQ96NB1 174 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 PAFAH2Q99487 392 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 FAM117AQ9C073 453 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 SPRTNQ9H040 489 aaPredicted RBP13.7□□□□□ -0.22
LTBR-209ENST00000541102 ACTL8Q9H568 366 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 IRAK4Q9NWZ3 460 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 TAS2R13Q9NYV9 303 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.7□□□□□ -0.22
LTBR-209ENST00000541102 TRMT6Q9UJA5 497 aaKnown RBP13.7□□□□□ -0.22
LTBR-209ENST00000541102 FARSAQ9Y285 508 aaKnown RBP13.7□□□□□ -0.22
LTBR-209ENST00000541102 SEC16AO15027 2179 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 TLN1Q9Y490 2541 aaKnown RBP13.7□□□□□ -0.22
LTBR-209ENST00000541102 FOXO6A8MYZ6 492 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 E7EQ34 232 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 ZNF749O43361 778 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 HCRTR1O43613 425 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 OR2B3O76000 313 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 MATN4O95460 622 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 C1orf105O95561 183 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 FURINP09958 794 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 PLA2G2AP14555 144 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 PTPN4P29074 926 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 SF1Q15637 639 aaKnown RBP13.69□□□□□ -0.22
LTBR-209ENST00000541102 CRTC2Q53ET0 693 aaPredicted RBP13.69□□□□□ -0.22
LTBR-209ENST00000541102 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.69□□□□□ -0.22
LTBR-209ENST00000541102 MROH9Q5TGP6 573 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 GPR135Q8IZ08 494 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 SPATA6LQ8N4H0 392 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 OR2L8Q8NGY9 312 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 OR2W6PQ8NHA6 318 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 UBLCP1Q8WVY7 318 aaPredicted RBP13.69□□□□□ -0.22
LTBR-209ENST00000541102 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.69□□□□□ -0.22
LTBR-209ENST00000541102 RAD51AP1Q96B01 352 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 LINGO1Q96FE5 620 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 DHRS4Q9BTZ2 278 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 MENTQ9BUN1 341 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 GPR87Q9BY21 358 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 UNKQ9C0B0 810 aaKnown RBP13.69□□□□□ -0.22
LTBR-209ENST00000541102 PCMTD2Q9NV79 361 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 TXNDC16Q9P2K2 825 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 KLHL42Q9P2K6 505 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 ADAMTS6Q9UKP5 1117 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 CORO1CQ9ULV4 474 aaPredicted RBP13.69□□□□□ -0.22
LTBR-209ENST00000541102 POLHQ9Y253 713 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 PCDHGA6Q9Y5G7 932 aa13.69□□□□□ -0.22
LTBR-209ENST00000541102 HEMK1Q9Y5R4 338 aaPredicted RBP13.69□□□□□ -0.22
LTBR-209ENST00000541102 ARHGEF33A8MVX0 844 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 RASGRF2O14827 1237 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 CTSBP07858 339 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 MSL3P1P0C860 447 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 ZNF37AP17032 561 aaPredicted RBP13.68□□□□□ -0.22
LTBR-209ENST00000541102 MAGP20916 626 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 ATP5DP30049 168 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 SPRP35270 261 aaPredicted RBP13.68□□□□□ -0.22
LTBR-209ENST00000541102 CSRP3P50461 194 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 POU4F1Q01851 419 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 DLG1Q12959 904 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 PDAP1Q13442 181 aaKnown RBP13.68□□□□□ -0.22
LTBR-209ENST00000541102 USP10Q14694 798 aaKnown RBP13.68□□□□□ -0.22
LTBR-209ENST00000541102 ZKSCAN8Q15776 578 aaPredicted RBP13.68□□□□□ -0.22
LTBR-209ENST00000541102 PTCHD3Q3KNS1 767 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 PRICKLE2Q7Z3G6 844 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 DSELQ8IZU8 1212 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 ASB11Q8WXH4 323 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 CAVIN3Q969G5 261 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 SLC22A18Q96BI1 424 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 ZBTB9Q96C00 473 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 LRFN5Q96NI6 719 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 SLC25A18Q9H1K4 315 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 ADNPQ9H2P0 1102 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 ZNF71Q9NQZ8 489 aaPredicted RBP13.68□□□□□ -0.22
LTBR-209ENST00000541102 STARD5Q9NSY2 213 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 CTNNAL1Q9UBT7 734 aa13.68□□□□□ -0.22
LTBR-209ENST00000541102 EXOC1LA0A1B0GW35 172 aa13.67□□□□□ -0.22
LTBR-209ENST00000541102 SLC28A2O43868 658 aa13.67□□□□□ -0.22
LTBR-209ENST00000541102 PSIP1O75475 530 aaKnown RBP13.67□□□□□ -0.22
LTBR-209ENST00000541102 ALDOAP04075 364 aaKnown RBP13.67□□□□□ -0.22
LTBR-209ENST00000541102 HBQ1P09105 142 aa13.67□□□□□ -0.22
LTBR-209ENST00000541102 MPC1LP0DKB6 136 aa13.67□□□□□ -0.22
LTBR-209ENST00000541102 RORAP35398 523 aa13.67□□□□□ -0.22
LTBR-209ENST00000541102 CCNFP41002 786 aa13.67□□□□□ -0.22
LTBR-209ENST00000541102 GRIA3P42263 894 aa13.67□□□□□ -0.22
LTBR-209ENST00000541102 SKIV2L2P42285 1042 aaKnown RBP13.67□□□□□ -0.22
LTBR-209ENST00000541102 MSH2P43246 934 aa13.67□□□□□ -0.22
LTBR-209ENST00000541102 GABRA4P48169 554 aa13.67□□□□□ -0.22
LTBR-209ENST00000541102 C1orf189Q5VU69 101 aa13.67□□□□□ -0.22
LTBR-209ENST00000541102 FAM69BQ5VUD6 431 aa13.67□□□□□ -0.22
LTBR-209ENST00000541102 PTRH1Q86Y79 214 aaKnown RBP13.67□□□□□ -0.22
LTBR-209ENST00000541102 SYTL1Q8IYJ3 562 aa13.67□□□□□ -0.22
LTBR-209ENST00000541102 DNAJC22Q8N4W6 341 aa13.67□□□□□ -0.22
LTBR-209ENST00000541102 RAB42Q8N4Z0 105 aa13.67□□□□□ -0.22
LTBR-209ENST00000541102 ZNF655Q8N720 491 aaPredicted RBP13.67□□□□□ -0.22
LTBR-209ENST00000541102 ENDOVQ8N8Q3 282 aaKnown RBP13.67□□□□□ -0.22
LTBR-209ENST00000541102 CHRNA10Q9GZZ6 450 aa13.67□□□□□ -0.22
LTBR-209ENST00000541102 PLCL2Q9UPR0 1127 aa13.67□□□□□ -0.22
LTBR-209ENST00000541102 KCNMB2Q9Y691 235 aa13.67□□□□□ -0.22
LTBR-209ENST00000541102 AP1M2Q9Y6Q5 423 aa13.67□□□□□ -0.22
LTBR-209ENST00000541102 SNRNP200O75643 2136 aaKnown RBP13.67□□□□□ -0.22
LTBR-209ENST00000541102 HELZ2Q9BYK8 2649 aaKnown RBP13.66□□□□□ -0.22
LTBR-209ENST00000541102 GCN1Q92616 2671 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms