RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, human

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-210	ENST00000540975	EGFL8	Q99944	293 aa		5.12	□□□□□ -1.59
YBX3-210	ENST00000540975	PYGO2	Q9BRQ0	406 aa		5.12	□□□□□ -1.59
YBX3-210	ENST00000540975	MTMR12	Q9C0I1	747 aa		5.12	□□□□□ -1.59
YBX3-210	ENST00000540975	CPSF3	Q9UKF6	684 aa	Known RBP	5.12	□□□□□ -1.59
YBX3-210	ENST00000540975	MAN1B1	Q9UKM7	699 aa		5.12	□□□□□ -1.59
YBX3-210	ENST00000540975	MEX3A	A1L020	520 aa	Known RBP	5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	KPNA7	A9QM74	516 aa		5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	C22orf31	O95567	290 aa		5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	ADRB2	P07550	413 aa		5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	TRIM49	P0CI25	452 aa		5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	TRIM49C	P0CI26	452 aa		5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	SLC2A2	P11168	524 aa	Predicted RBP	5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	GP1BB	P13224	206 aa		5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	AKR1B1	P15121	316 aa		5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	PCGF2	P35227	344 aa		5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	MMP12	P39900	470 aa		5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	ASCL1	P50553	236 aa		5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	CSNK2B	P67870	215 aa		5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	CNPY4	Q8N129	248 aa		5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	NDUFAF2	Q8N183	169 aa		5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	GTF3A	Q92664	365 aa	Known RBP	5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	MOB3A	Q96BX8	217 aa		5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	ZNF486	Q96H40	463 aa	Predicted RBP	5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	FAM71F1	Q96KD3	344 aa	Predicted RBP	5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	LINC00615	Q96LM1	132 aa	Predicted RBP	5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	NKX3-1	Q99801	234 aa	Predicted RBP	5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	PANK2	Q9BZ23	570 aa		5.11	□□□□□ -1.59
YBX3-210	ENST00000540975		Q9H8V8	135 aa		5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	CDH20	Q9HBT6	801 aa		5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	PCNX3	Q9H6A9	2034 aa		5.11	□□□□□ -1.59
YBX3-210	ENST00000540975	TDRD15	B5MCY1	1934 aa	Known RBP	5.1	□□□□□ -1.59
YBX3-210	ENST00000540975	UGT1A4	P22310	534 aa		5.1	□□□□□ -1.59
YBX3-210	ENST00000540975	VAMP7	P51809	220 aa		5.1	□□□□□ -1.59
YBX3-210	ENST00000540975	HUNK	P57058	714 aa		5.1	□□□□□ -1.59
YBX3-210	ENST00000540975	CUL3	Q13618	768 aa		5.1	□□□□□ -1.59
YBX3-210	ENST00000540975	SNAI3	Q3KNW1	292 aa		5.1	□□□□□ -1.59
YBX3-210	ENST00000540975	C9orf152	Q5JTZ5	239 aa		5.1	□□□□□ -1.59
YBX3-210	ENST00000540975	TCTE1	Q5JU00	501 aa		5.1	□□□□□ -1.59
YBX3-210	ENST00000540975	LYSMD4	Q5XG99	296 aa		5.1	□□□□□ -1.59
YBX3-210	ENST00000540975	ZBTB49	Q6ZSB9	765 aa		5.1	□□□□□ -1.59
YBX3-210	ENST00000540975	MAPK15	Q8TD08	544 aa		5.1	□□□□□ -1.59
YBX3-210	ENST00000540975	GATAD1	Q8WUU5	269 aa		5.1	□□□□□ -1.59
YBX3-210	ENST00000540975	SECISBP2L	Q93073	1101 aa	Known RBP	5.1	□□□□□ -1.59
YBX3-210	ENST00000540975	NSMCE3	Q96MG7	304 aa		5.1	□□□□□ -1.59
YBX3-210	ENST00000540975	WWTR1	Q9GZV5	400 aa		5.1	□□□□□ -1.59
YBX3-210	ENST00000540975	ZMYND12	Q9H0C1	365 aa		5.1	□□□□□ -1.59
YBX3-210	ENST00000540975	UPF3A	Q9H1J1	476 aa	Known RBP	5.1	□□□□□ -1.59
YBX3-210	ENST00000540975	CHST11	Q9NPF2	352 aa		5.1	□□□□□ -1.59
YBX3-210	ENST00000540975	C19orf25	Q9UFG5	118 aa	Predicted RBP	5.1	□□□□□ -1.59
YBX3-210	ENST00000540975		A0A1W2PR80	420 aa		5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	SNURFL	B1AK76	121 aa		5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	TADA2A	O75478	443 aa		5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	SAG	P10523	405 aa	Predicted RBP	5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	CD22	P20273	847 aa		5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	LHCGR	P22888	699 aa		5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	LIMK1	P53667	647 aa		5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	RALGDS	Q12967	914 aa		5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	EXT1	Q16394	746 aa		5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	ZNF74	Q16587	644 aa		5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	CRY2	Q49AN0	593 aa		5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	GLIPR1L2	Q4G1C9	344 aa		5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	NAA16	Q6N069	864 aa	Predicted RBP	5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	DET1	Q7L5Y6	550 aa		5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	CENPV	Q7Z7K6	275 aa	Predicted RBP	5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	IQCH	Q86VS3	1027 aa		5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	SLC4A11	Q8NBS3	891 aa		5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	OR6S1	Q8NH40	331 aa		5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	ZNF519	Q8TB69	540 aa		5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	CPNE1	Q99829	537 aa		5.09	□□□□□ -1.59
YBX3-210	ENST00000540975	SPHK2	Q9NRA0	654 aa		5.09	□□□□□ -1.59
YBX3-210	ENST00000540975		R4GN57	208 aa		5.09	□□□□□ -1.59
YBX3-210	ENST00000540975		A0A1W2PPK0	400 aa		5.08	□□□□□ -1.6
YBX3-210	ENST00000540975	SYNDIG1L	A6NDD5	238 aa		5.08	□□□□□ -1.6
YBX3-210	ENST00000540975	CASTOR2	A6NHX0	329 aa		5.08	□□□□□ -1.6
YBX3-210	ENST00000540975		O00370	1275 aa		5.08	□□□□□ -1.6
YBX3-210	ENST00000540975	CSN3	P07498	182 aa		5.08	□□□□□ -1.6
YBX3-210	ENST00000540975	CYP11B2	P19099	503 aa		5.08	□□□□□ -1.6
YBX3-210	ENST00000540975	CAPZA2	P47755	286 aa		5.08	□□□□□ -1.6
YBX3-210	ENST00000540975	LMO4	P61968	165 aa		5.08	□□□□□ -1.6
YBX3-210	ENST00000540975	KRT71	Q3SY84	523 aa		5.08	□□□□□ -1.6
YBX3-210	ENST00000540975	PLPPR4	Q7Z2D5	763 aa		5.08	□□□□□ -1.6
YBX3-210	ENST00000540975	MAML2	Q8IZL2	1156 aa	Predicted RBP	5.08	□□□□□ -1.6
YBX3-210	ENST00000540975	PRSS33	Q8NF86	280 aa		5.08	□□□□□ -1.6
YBX3-210	ENST00000540975	OR7A2P	Q8NGA2	310 aa		5.08	□□□□□ -1.6
YBX3-210	ENST00000540975	OR10Q1	Q8NGQ4	319 aa		5.08	□□□□□ -1.6
YBX3-210	ENST00000540975	C4orf45	Q96LM5	186 aa		5.08	□□□□□ -1.6
YBX3-210	ENST00000540975	SPAG5	Q96R06	1193 aa		5.08	□□□□□ -1.6
YBX3-210	ENST00000540975	THEG	Q9P2T0	379 aa		5.08	□□□□□ -1.6
YBX3-210	ENST00000540975	NAP1L2	Q9ULW6	460 aa	Predicted RBP	5.08	□□□□□ -1.6
YBX3-210	ENST00000540975	CHKB	Q9Y259	395 aa		5.08	□□□□□ -1.6
YBX3-210	ENST00000540975	COL5A2	P05997	1499 aa	Predicted RBP	5.07	□□□□□ -1.6
YBX3-210	ENST00000540975		A0A1B0GVY2	172 aa		5.07	□□□□□ -1.6
YBX3-210	ENST00000540975	TRBC2	A0A5B9	178 aa		5.07	□□□□□ -1.6
YBX3-210	ENST00000540975	MPTX1	A8MV57	137 aa		5.07	□□□□□ -1.6
YBX3-210	ENST00000540975	CELF2	O95319	508 aa	Known RBP	5.07	□□□□□ -1.6
YBX3-210	ENST00000540975	ACSL3	O95573	720 aa		5.07	□□□□□ -1.6
YBX3-210	ENST00000540975	ATP5B	P06576	529 aa	Known RBP	5.07	□□□□□ -1.6
YBX3-210	ENST00000540975	IL11	P20809	199 aa		5.07	□□□□□ -1.6
YBX3-210	ENST00000540975	PTMS	P20962	102 aa		5.07	□□□□□ -1.6

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