RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	LMAN2	Q12907	356 aa		5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	TUBA3C	Q13748	450 aa		5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	CAMK1	Q14012	370 aa		5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	COLEC12	Q5KU26	742 aa		5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	SULT1C3	Q6IMI6	304 aa		5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	UGT3A1	Q6NUS8	523 aa		5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	C22orf39	Q6P5X5	142 aa		5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	UMODL1-AS1	Q8N2C9	162 aa		5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	POC5	Q8NA72	575 aa		5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	LPCAT1	Q8NF37	534 aa		5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	STON2	Q8WXE9	905 aa		5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	MYO19	Q96H55	970 aa		5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	ZNF641	Q96N77	438 aa	Predicted RBP	5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	CTRC	Q99895	268 aa		5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	MYOC	Q99972	504 aa		5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	WDR12	Q9GZL7	423 aa	Known RBP	5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	IL36A	Q9UHA7	158 aa		5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	CRLS1	Q9UJA2	301 aa		5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	FBXO10	Q9UK96	956 aa		5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	SLC27A6	Q9Y2P4	619 aa		5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	CAB39	Q9Y376	341 aa	Predicted RBP	5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	GPR45	Q9Y5Y3	372 aa		5.53	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	CENPF	P49454	3210 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TCRBV21S2A2	A0A5A6	115 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZNF99	A8MXY4	864 aa	Predicted RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FAM47E-STBD1	D6RA91	191 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SNPH	O15079	494 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MATN3	O15232	486 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FADS2	O95864	444 aa	Known RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OLFM2	O95897	454 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FGF1	P05230	155 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	S100A1	P23297	94 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ATP4B	P51164	291 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	POLR2J	P52435	117 aa	Known RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CSTF1	Q05048	431 aa	Known RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SMN1	Q16637	294 aa	Known RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	UBE2U	Q5VVX9	321 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ASTL	Q6HA08	431 aa	Predicted RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SPATC1	Q76KD6	591 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TAS2R42	Q7RTR8	314 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CYP2U1	Q7Z449	544 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TMEM179B	Q7Z7N9	219 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RIMKLA	Q8IXN7	391 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OXR1	Q8N573	874 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	AVL9	Q8NBF6	648 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MCOLN3	Q8TDD5	553 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	EDA	Q92838	391 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ATOH1	Q92858	354 aa	Predicted RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MUL1	Q969V5	352 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SLC39A13	Q96H72	371 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CNDP2	Q96KP4	475 aa	Known RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TBATA	Q96M53	351 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FOPNL	Q96NB1	174 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SEMA3C	Q99985	751 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HGH1	Q9BTY7	390 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RNF38	Q9H0F5	515 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LINC00597	Q9H2U6	94 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SGK2	Q9HBY8	427 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	POLR3B	Q9NW08	1133 aa	Predicted RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PCDHB9	Q9Y5E1	797 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CXorf51A	A0A1B0GTR3	108 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SLC1A7	O00341	560 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FPGT	O14772	594 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GSTA4	O15217	222 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ELFN1	P0C7U0	828 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	C7	P10643	843 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NEK2	P51955	445 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	COPZ1	P61923	177 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	AASDH	Q4L235	1098 aa	Predicted RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RBM48	Q5RL73	367 aa	Known RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	IRAK1BP1	Q5VVH5	260 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KIAA0930	Q6ICG6	404 aa	Predicted RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GDPD4	Q6W3E5	623 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RAB44	Q7Z6P3	723 aa	Predicted RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	C14orf80	Q86SX3	495 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	AKAP14	Q86UN6	197 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CILP2	Q8IUL8	1156 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ADGRG2	Q8IZP9	1017 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FNDC5	Q8NAU1	212 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FAM83F	Q8NEG4	500 aa	Predicted RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OR2T11	Q8NH01	316 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PTCD2	Q8WV60	388 aa	Known RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RORB	Q92753	470 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HDAC2	Q92769	488 aa	Known RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	UBE2F	Q969M7	185 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ISG20	Q96AZ6	181 aa	Known RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FCRL5	Q96RD9	977 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PSD2	Q9BQI7	771 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	THUMPD3	Q9BV44	507 aa	Known RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TRIM54	Q9BYV2	358 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TRIT1	Q9H3H1	467 aa	Known RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FBXL12	Q9NXK8	326 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GALP	Q9UBC7	116 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZNF639	Q9UID6	485 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MUTYH	Q9UIF7	546 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	IKZF3	Q9UKT9	509 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PCDHGA3	Q9Y5H0	932 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	UBA6	A0AVT1	1052 aa	Predicted RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783		A8MV72	311 aa	Predicted RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	WASH4P	A8MWX3	477 aa		5.52	□□□□□ -1.53

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