RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 DESI1Q6ICB0 168 aa5.92□□□□□ -1.46
PTPRD-214ENST00000540109 CES3Q6UWW8 571 aa5.92□□□□□ -1.46
PTPRD-214ENST00000540109 CXCL17Q6UXB2 119 aa5.92□□□□□ -1.46
PTPRD-214ENST00000540109 ZFPM2Q8WW38 1151 aa5.92□□□□□ -1.46
PTPRD-214ENST00000540109 SLC7A6OSQ96CW6 309 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-214ENST00000540109 SNTG1Q9NSN8 517 aa5.92□□□□□ -1.46
PTPRD-214ENST00000540109 ZSCAN32Q9NX65 697 aa5.92□□□□□ -1.46
PTPRD-214ENST00000540109 SAGE1Q9NXZ1 904 aa5.92□□□□□ -1.46
PTPRD-214ENST00000540109 B3GNT2Q9NY97 397 aa5.92□□□□□ -1.46
PTPRD-214ENST00000540109 XPR1Q9UBH6 696 aa5.92□□□□□ -1.46
PTPRD-214ENST00000540109 PLEKHA6Q9Y2H5 1048 aa5.92□□□□□ -1.46
PTPRD-214ENST00000540109 NME7Q9Y5B8 376 aa5.92□□□□□ -1.46
PTPRD-214ENST00000540109 CPQQ9Y646 472 aa5.92□□□□□ -1.46
PTPRD-214ENST00000540109 PATJQ8NI35 1801 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 LOC102724200A0A096LPH7 203 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-214ENST00000540109 KCNU1A8MYU2 1149 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 DISC1C4P0D8 188 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 HHLA1C9JL84 531 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 PGRMC2O15173 223 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 VPS26AO75436 327 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 METTL18O95568 372 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 GUCA1CO95843 209 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 CHRNA1P02708 482 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 ASGR1P07306 291 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 FMO3P31513 532 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 IDUAP35475 653 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 RORCP51449 518 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 CLCNKBP51801 687 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 ARFIP1P53367 373 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 POU4F1Q01851 419 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 TIGD6Q17RP2 521 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 DPY19L1Q2PZI1 675 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 NOMO2Q5JPE7 1267 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 TNS4Q8IZW8 715 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 TMEM199Q8N511 208 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 CDYL2Q8N8U2 506 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 SPPL2BQ8TCT7 592 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 CERS2Q96G23 380 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 TSNAXQ99598 290 aaKnown RBP5.91□□□□□ -1.46
PTPRD-214ENST00000540109 PKMYT1Q99640 499 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 TGIF2Q9GZN2 237 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 MCCC2Q9HCC0 563 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 TMEM39AQ9NV64 488 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 OR12D3Q9UGF7 316 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 HCN4Q9Y3Q4 1203 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 PCDHGA7Q9Y5G6 932 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 CBY3A6NI87 242 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 KPNA5O15131 536 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 SGTAO43765 313 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 CACNG3O60359 315 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 NOBOXO60393 691 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 B3GAT3O94766 335 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 SLITRK5O94991 958 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 PTPN3P26045 913 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 CD79BP40259 229 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 MAGEA12P43365 314 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 OR3A3P47888 321 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 FLT3LGP49771 235 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 ERVFC1P60507 584 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 RACK1P63244 317 aaKnown RBP5.91□□□□□ -1.46
PTPRD-214ENST00000540109 CLCQ05315 142 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 RHEBQ15382 184 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 TEAD4Q15561 434 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 OTUD1Q5VV17 481 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-214ENST00000540109 PNCKQ6P2M8 343 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 ADGRD2Q7Z7M1 963 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 ABI1Q8IZP0 508 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 GDPD1Q8N9F7 314 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 TRIB2Q92519 343 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 REXO5Q96IC2 774 aaKnown RBP5.91□□□□□ -1.46
PTPRD-214ENST00000540109 RANBP9Q96S59 729 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 SCPEP1Q9HB40 452 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 PIGVQ9NUD9 493 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 ZNF223Q9UK11 482 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-214ENST00000540109 PADI2Q9Y2J8 665 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 PCDHGB1Q9Y5G3 927 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 WDR27A2RRH5 827 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 TMEM88BA6NKF7 163 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 FAM155AB1AL88 458 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-214ENST00000540109 SLC30A4O14863 429 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 BCKDKO14874 412 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 VILLO15195 856 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 SLC28A2O43868 658 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 KRT33AO76009 404 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 INMTO95050 263 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 ALX3O95076 343 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 MTHFRP42898 656 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 SP3Q02447 781 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 PIGFQ07326 219 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 NFATC3Q12968 1075 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 BIKQ13323 160 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 CSHL1Q14406 222 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 TIGD5Q53EQ6 642 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 METTL2BQ6P1Q9 378 aaKnown RBP5.91□□□□□ -1.46
PTPRD-214ENST00000540109 ZNF549Q6P9A3 640 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 ERMP1Q7Z2K6 904 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 PIWIL3Q7Z3Z3 882 aaKnown RBP5.91□□□□□ -1.46
PTPRD-214ENST00000540109 METTL25Q8N6Q8 603 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 OR5K1Q8NHB7 308 aa5.91□□□□□ -1.46
PTPRD-214ENST00000540109 MAFIPQ8WZ33 124 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms