RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 B3GNT4Q9C0J1 378 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 CHRNA10Q9GZZ6 450 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 KLHL25Q9H0H3 589 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 ALG9Q9H6U8 611 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 NMRAL1Q9HBL8 299 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 APMAPQ9HDC9 416 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 SLC6A20Q9NP91 592 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 CCDC177Q9NQR7 707 aaPredicted RBP6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 FBXO8Q9NRD0 319 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 SOHLH2Q9NX45 425 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 FOXJ2Q9P0K8 574 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 TAC3Q9UHF0 121 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 PCDHB11Q9Y5F2 797 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 PCDHGA7Q9Y5G6 932 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 PCDHGA3Q9Y5H0 932 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 KLK4Q9Y5K2 254 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 AK5Q9Y6K8 562 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 APC2O95996 2303 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 LOC400499M0QZD8 3231 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 IGKV1-8A0A0C4DH67 115 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 KRTAP4-8A0A0G2JLE6 195 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 IQANK1A0A1B0GTG1 560 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 CCDC189A1A4V9 331 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 NVLO15381 856 aaKnown RBP6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 ST8SIA5O15466 376 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 HCRTR1O43613 425 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 TLX3O43711 291 aaPredicted RBP6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 NRP2O60462 931 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 PRAMEF10O60809 474 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 KERAO60938 352 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 CDH16O75309 829 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 CCNDBP1O95273 360 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 ANXA5P08758 320 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 CCND1P24385 295 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 RBMS1P29558 406 aaKnown RBP6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 CMPK1P30085 196 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 SLC5A2P31639 672 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 RPA3P35244 121 aaPredicted RBP6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 GRIA3P42263 894 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 SLCO1A2P46721 670 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 SLC6A12P48065 614 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 GLRBP48167 497 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 ARL4DP49703 201 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 HNMTP50135 292 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 ERVPABLB-1P60509 514 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 ACY1Q03154 408 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 FOXM1Q08050 763 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 CYP4F3Q08477 520 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 TSTA3Q13630 321 aaPredicted RBP6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 SF1Q15637 639 aaKnown RBP6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 GPR19Q15760 415 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 FAM83EQ2M2I3 478 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 DEFB110Q30KQ9 67 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 TBC1D25Q3MII6 688 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 TECRLQ5HYJ1 363 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 LGSNQ5TDP6 509 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 PRAMEF13Q5VWM6 474 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 ICE2Q659A1 982 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 FCRL6Q6DN72 434 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 CYB5D1Q6P9G0 228 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 LCTLQ6UWM7 567 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 TIFABQ6ZNK6 161 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 CDHR3Q6ZTQ4 885 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 RNF44Q7L0R7 432 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 ISCA2Q86U28 154 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 PLD6Q8N2A8 252 aaKnown RBP6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 PDPRQ8NCN5 879 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 OR56A3Q8NH54 315 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 RHEBL1Q8TAI7 183 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 ATL1Q8WXF7 558 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 USP7Q93009 1102 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 PYCR2Q96C36 320 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 RHBDF1Q96CC6 855 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 NXNL1Q96CM4 212 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 ZNF501Q96CX3 271 aaPredicted RBP6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 MED8Q96G25 268 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 TCTN2Q96GX1 697 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 ZNF578Q96N58 590 aaPredicted RBP6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 GPR78Q96P69 363 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 TEFMQ96QE5 360 aaKnown RBP6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 OR6C1Q96RD1 312 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 TAAR9Q96RI9 348 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 CTRCQ99895 268 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 EGFL8Q99944 293 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 CCDC77Q9BR77 488 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 TMEM79Q9BSE2 394 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 ACAT2Q9BWD1 397 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 ATG10Q9H0Y0 220 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 VPS11Q9H270 941 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 CCDC86Q9H6F5 360 aaKnown RBP6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 FAM60AQ9NP50 221 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 PDE7BQ9NP56 450 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 MRPS30Q9NP92 439 aaKnown RBP6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 THSD1Q9NS62 852 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 FGF21Q9NSA1 209 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 PCMTD2Q9NV79 361 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 ZNF358Q9NW07 568 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 CUEDC1Q9NWM3 386 aaPredicted RBP6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 SLC39A1Q9NY26 324 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 NUDT4Q9NZJ9 180 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms