RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 STC1P52823 247 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 ERVFC1P60507 584 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 AP1S1P61966 158 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 OLR1P78380 273 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 USP39Q53GS9 565 aaKnown RBP9.73□□□□□ -0.85
TRAF1-202ENST00000540010 CDC73Q6P1J9 531 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 RBM23Q86U06 439 aaKnown RBP9.73□□□□□ -0.85
TRAF1-202ENST00000540010 WFDC5Q8TCV5 224 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 ACDQ96AP0 544 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 Q96MT0 163 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 GFM1Q96RP9 751 aaKnown RBP9.73□□□□□ -0.85
TRAF1-202ENST00000540010 MAGEE1Q9HCI5 957 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 DNAJC11Q9NVH1 559 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 PATJQ8NI35 1801 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 HIDE1A8MVS5 230 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 ESR1P03372 595 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 PTPN2P17706 415 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 POLR2EP19388 210 aaKnown RBP9.73□□□□□ -0.85
TRAF1-202ENST00000540010 UGT2B15P54855 530 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 C2orf80Q0P641 193 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 TEAD2Q15562 447 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 ZNF829Q3KNS6 432 aaPredicted RBP9.73□□□□□ -0.85
TRAF1-202ENST00000540010 KLHL12Q53G59 568 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 RNASE12Q5GAN4 147 aaKnown RBP9.73□□□□□ -0.85
TRAF1-202ENST00000540010 SPANXN4Q5MJ08 99 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 MFSD4BQ5TF39 518 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 RAET1GQ6H3X3 334 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 C11orf65Q8NCR3 313 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 ASZ1Q8WWH4 475 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 STON2Q8WXE9 905 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 PEX13Q92968 403 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 ARMC5Q96C12 935 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 FNDC11Q9BVV2 318 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 C1QTNF1Q9BXJ1 281 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 NUDT4Q9NZJ9 180 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 EBF1Q9UH73 591 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 CDK14O94921 469 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 EFEMP2O95967 443 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 CYP2A6P11509 494 aaPredicted RBP9.73□□□□□ -0.85
TRAF1-202ENST00000540010 HPGDP15428 266 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 DNAJB1P25685 340 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 EEFSECP57772 596 aaKnown RBP9.73□□□□□ -0.85
TRAF1-202ENST00000540010 LMAN2Q12907 356 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 MZT2BQ6NZ67 158 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 PSRC1Q6PGN9 363 aaPredicted RBP9.73□□□□□ -0.85
TRAF1-202ENST00000540010 SLC29A1Q99808 456 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 SLC46A2Q9BY10 475 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 SLC7A5P2Q9GIP4 190 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 MIR1-1HGQ9H1L0 117 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 TOR3AQ9H497 397 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 NSUN3Q9H649 340 aaKnown RBP9.73□□□□□ -0.85
TRAF1-202ENST00000540010 TLE6Q9H808 572 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 TLR9Q9NR96 1032 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 ZNF222Q9UK12 451 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.72□□□□□ -0.85
TRAF1-202ENST00000540010 MAGEB17A8MXT2 336 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 SLC28A2O43868 658 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 MTX2O75431 263 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 PTGER3P43115 390 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 GPR1P46091 355 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 CACNG1Q06432 222 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 PTPRRQ15256 657 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 FNDC1Q4ZHG4 1894 aaPredicted RBP9.72□□□□□ -0.85
TRAF1-202ENST00000540010 NANOGP8Q6NSW7 305 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 SLC15A3Q8IY34 581 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 CENPSQ8N2Z9 138 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 PDPRQ8NCN5 879 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 MDGA1Q8NFP4 955 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 ANKRD49Q8WVL7 239 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 ING5Q8WYH8 240 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 TP53INP1Q96A56 240 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 VWCEQ96DN2 955 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 IL4I1Q96RQ9 567 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 MCMBPQ9BTE3 642 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 NANOGQ9H9S0 305 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 KCTD5Q9NXV2 234 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 MALT1Q9UDY8 824 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 ZNF221Q9UK13 617 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 ENTPD4Q9Y227 616 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 MICAL3Q7RTP6 2002 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 MYO7AQ13402 2215 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 CDH1P12830 882 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 BMPR1AP36894 532 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 MAPK8P45983 427 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 ARSFP54793 590 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 PTGR1Q14914 329 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 NCEH1Q6PIU2 408 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 LYSMD3Q7Z3D4 306 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 OR4F6Q8NGB9 312 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 CNPPD1Q9BV87 410 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 RC3H2Q9HBD1 1191 aaKnown RBP9.72□□□□□ -0.85
TRAF1-202ENST00000540010 SEC14L3Q9UDX4 400 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 ITM2BQ9Y287 266 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 SMAD6O43541 496 aaKnown RBP9.72□□□□□ -0.85
TRAF1-202ENST00000540010 RPL10P27635 214 aaKnown RBP9.72□□□□□ -0.85
TRAF1-202ENST00000540010 CD70P32970 193 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 VBP1P61758 197 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 GK3PQ14409 553 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 RAB39AQ14964 217 aa9.72□□□□□ -0.85
TRAF1-202ENST00000540010 TGFBIQ15582 683 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms